RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 COG5Q9UP83 839 aa10.87□□□□□ -0.67
HTT-204ENST00000508321 CEP83Q9Y592 693 aa10.87□□□□□ -0.67
HTT-204ENST00000508321 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CYP26A1O43174 497 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 VNN2O95498 520 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 FGF19O95750 216 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 LSM8O95777 96 aaKnown RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 GYPCP04921 128 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CCDC130P13994 396 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CYP11B1P15538 503 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 MRE11P49959 708 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 EPHB3P54753 998 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 BST2Q10589 180 aaKnown RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 DUSP4Q13115 394 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ORC1Q13415 861 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CNGA2Q16280 664 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 GOLGA7BQ2TAP0 167 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 PPP1R26Q5T8A7 1209 aaPredicted RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 SFMBT2Q5VUG0 894 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 PPP1R2P3Q6NXS1 205 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 LLGL2Q6P1M3 1020 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 TRIM72Q6ZMU5 477 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ANKRD52Q8NB46 1076 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ATAD1Q8NBU5 361 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 VN1R2Q8NFZ6 395 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 EPS8L1Q8TE68 723 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 DUSP16Q9BY84 665 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 UBXN6Q9BZV1 441 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ZNF518BQ9C0D4 1074 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 IGFLR1Q9H665 355 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CYLDQ9NQC7 956 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 COMMD8Q9NX08 183 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 CLDND1Q9NY35 253 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 UXTQ9UBK9 157 aaPredicted RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 TSPAN16Q9UKR8 245 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 LUC7L2Q9Y383 392 aaKnown RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 BZW2Q9Y6E2 419 aaKnown RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 OBSL1O75147 1896 aa10.86□□□□□ -0.67
HTT-204ENST00000508321 ZNF638Q14966 1978 aaKnown RBP10.86□□□□□ -0.67
HTT-204ENST00000508321 TTC28Q96AY4 2481 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 M0QYV0 167 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 XPO1O14980 1071 aaKnown RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 THAP12O43422 761 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 MFAP3LO75121 409 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 TBX10O75333 385 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 AP1G2O75843 785 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 GFPT2O94808 682 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 SEC24AO95486 1093 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 CSH1P0DML2 217 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 CSH2P0DML3 217 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 BDNFP23560 247 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 CYP2F1P24903 491 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 ADORA2BP29275 332 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
HTT-204ENST00000508321 CLCN1P35523 988 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 GRIK1P39086 918 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 PRKCIP41743 596 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 PLA2G4AP47712 749 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 TWF1Q12792 350 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 ASIC2Q16515 512 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 CES5AQ6NT32 575 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 CLEC20AQ6ZU45 233 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 TMC6Q7Z403 805 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 SLC47A2Q86VL8 602 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 C12orf29Q8N999 325 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 MSANTD4Q8NCY6 345 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 MAFAQ8NHW3 353 aaPredicted RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 ZNF606Q8WXB4 792 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 PSMG2Q969U7 264 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 TRMT2BQ96GJ1 504 aaKnown RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 NECTIN4Q96NY8 510 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 NOX5Q96PH1 765 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 PRKD2Q9BZL6 878 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 UBE2ZQ9H832 354 aaPredicted RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 AVENQ9NQS1 362 aaPredicted RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 AIPL1Q9NZN9 384 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 IMPACTQ9P2X3 320 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 NOCTQ9UK39 431 aaKnown RBP10.85□□□□□ -0.67
HTT-204ENST00000508321 DENND4CQ5VZ89 1909 aa10.85□□□□□ -0.67
HTT-204ENST00000508321 NCANO14594 1321 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 F8VP50 259 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
HTT-204ENST00000508321 AP5Z1O43299 807 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
HTT-204ENST00000508321 ADCY5O95622 1261 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 ATF6P18850 670 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 HNRNPH3P31942 346 aaKnown RBP10.84□□□□□ -0.67
HTT-204ENST00000508321 CASP14P31944 242 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 KRT9P35527 623 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 SNX16P57768 344 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 CDR2Q01850 454 aa10.84□□□□□ -0.67
HTT-204ENST00000508321 TBX2Q13207 712 aaPredicted RBP10.84□□□□□ -0.67
HTT-204ENST00000508321 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
HTT-204ENST00000508321 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms