RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 CBWD2Q8IUF1 395 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 C12orf56Q8IXR9 622 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 DCP1BQ8IZD4 617 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 PDCL2Q8N4E4 241 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 CSGALNACT2Q8N6G5 542 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 TOP6BLQ8N6T0 577 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 PJA1Q8NG27 643 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 SHKBP1Q8TBC3 707 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 SPPL2BQ8TCT7 592 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 DEPDC1BQ8WUY9 529 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 SCFD1Q8WVM8 642 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 CLDN23Q96B33 292 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 TRMT61BQ9BVS5 477 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 AGPAT3Q9NRZ7 376 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 INTS13Q9NVM9 706 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 HSPBP1Q9NZL4 362 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 USP25Q9UHP3 1055 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 SIX4Q9UIU6 781 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 AGAP1Q9UPQ3 857 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 ZDHHC9Q9Y397 364 aa8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 TPRP12270 2363 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-222ENST00000508238 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 FAM237AA0A1B0GTK4 181 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 SHISA7A6NL88 538 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 HUS1O60921 280 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 DKK1O94907 266 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 ITGB3P05106 788 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 MYL1P05976 194 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 HAPLN1P10915 354 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 GLULP15104 373 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 ATF6P18850 670 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 MAGEA9P43362 315 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 LHX1P48742 406 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 FCHO2Q0JRZ9 810 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 ANGPT1Q15389 498 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 TEAD2Q15562 447 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 SNRNP35Q16560 246 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 PKDCCQ504Y2 493 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 SCARA3Q6AZY7 606 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 HS2ST1Q7LGA3 356 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 WDR49Q8IV35 697 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 MFSD6LQ8IWD5 586 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 TTC9BQ8N6N2 239 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 OR5B17Q8NGF7 314 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 GOLGA5Q8TBA6 731 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 ZSCAN18Q8TBC5 510 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 IRF7Q92985 503 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 PKMYT1Q99640 499 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 MKNK1Q9BUB5 465 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 MTMR12Q9C0I1 747 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 SEMA4AQ9H3S1 761 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 OBP2AQ9NY56 170 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 ZMIZ1Q9ULJ6 1067 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 L1RE1Q9UN81 338 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 HPSEQ9Y251 543 aa8.54□□□□□ -1.04
UBE2D3-222ENST00000508238 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FAM170BA6NMN3 283 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ARNTLO00327 626 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MAN2B1O00754 1011 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 KLRC4O43908 158 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PRPF40AO75400 957 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 SOAT2O75908 522 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 TNNC2P02585 160 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 DCNP07585 359 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 TMEM191BP0C7N4 346 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 HMGA1P17096 107 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 GJA1P17302 382 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PCSK1P29120 753 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 CDC25CP30307 473 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 VIPR2P41587 438 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 RPS9P46781 194 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 RELBQ01201 579 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MYL7Q01449 175 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 TSPY1Q01534 308 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MYO1EQ12965 1108 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PSMD2Q13200 908 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FZD5Q13467 585 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 CUL4BQ13620 913 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 VEPH1Q14D04 833 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PSMD6Q15008 389 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 KNOP1Q1ED39 458 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 SOWAHAQ2M3V2 549 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MGAT5BQ3V5L5 792 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 CFAP221Q4G0U5 840 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FAM171BQ6P995 826 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 VITQ6UXI7 678 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ZNF852Q6ZMS4 543 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ARID3BQ8IVW6 561 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms