RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 P4HA1P13674 534 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 GRIK1P39086 918 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 NR1H3Q13133 447 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 CUL4BQ13620 913 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 KCNB1Q14721 858 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 FBXO43Q4G163 708 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 TXNDC8Q6A555 127 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 CPA6Q8N4T0 437 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 OR6B3Q8NGW1 331 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 C8orf48Q96LL4 319 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 TRPM5Q9NZQ8 1165 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 SERTAD1Q9UHV2 236 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 DENND4CQ5VZ89 1909 aa15.4■□□□□ 0.06
HMGCS1-203ENST00000507004 CCDC163A0A0D9SF12 145 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 TRDMT1O14717 391 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 ACTN4O43707 911 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 FOXD2O60548 495 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 CST3P01034 146 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 RPN1P04843 607 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 TDGF1P13385 188 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 DRD1P21728 446 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 IFNAR2P48551 515 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 GPR15P49685 360 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 NOP14P78316 857 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 CLDN10P78369 228 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 CCINQ13939 588 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 MTF1Q14872 753 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 LONP2Q86WA8 852 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 TAF4BQ92750 862 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 ATP2A3Q93084 1043 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 PAGE5Q96GU1 130 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 PCED1BQ96HM7 432 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 ZFYVE19Q96K21 471 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 TNIP3Q96KP6 325 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 TTLL2Q9BWV7 592 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 DNAI2Q9GZS0 605 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 CRTAC1Q9NQ79 661 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 ARHGAP26Q9UNA1 814 aa15.39■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 COL4A3Q01955 1670 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 A8MXQ7 604 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PRR5-ARHGAP8B1AHC4 643 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 IKBKBO14920 756 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 MAPK13O15264 365 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 KLRC4O43908 158 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 LRP3O75074 770 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PDGFRBP09619 1106 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PFKFB1P16118 471 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 HDCP19113 662 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 BDNFP23560 247 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 LMO2P25791 158 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 SYKP43405 635 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 SOX9P48436 509 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 ARHGAP8P85298 464 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 ENPEPQ07075 957 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 USP4Q13107 963 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 BIRC3Q13489 604 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PUM1Q14671 1186 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PON2Q15165 354 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF667Q5HYK9 610 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 TMEM196Q5HYL7 178 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 SDHAF4Q5VUM1 108 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 LAIR1Q6GTX8 287 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 TXNDC11Q6PKC3 985 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 TSSK4Q6SA08 328 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PDZD8Q8NEN9 1154 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 TMC2Q8TDI7 906 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 PARD3BQ8TEW8 1205 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 OSCP1Q8WVF1 389 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 SMG9Q9H0W8 520 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 TRPC7Q9HCX4 862 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 DMAC2Q9NW81 257 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 HPSEQ9Y251 543 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 FRMD4BQ9Y2L6 1034 aa15.38■□□□□ 0.05
HMGCS1-203ENST00000507004 FAM237AA0A1B0GTK4 181 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 SLC9A3R1O14745 358 aaPredicted RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 ATP2C2O75185 946 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 TADA3O75528 432 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 NFATC1O95644 943 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 SATB1Q01826 763 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 LMNB2Q03252 620 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 TNK2Q07912 1038 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 STK4Q13043 487 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF77Q15935 545 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF699Q32M78 642 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 KMT5BQ4FZB7 885 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms