RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 FOXN1O15353 648 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 PRAMEF10O60809 474 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 VPS4BO75351 444 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 ATXN1LP0C7T5 689 aaKnown RBP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 VEGFAP15692 232 aaPredicted RBP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 GCLCP48506 637 aaPredicted RBP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 DGKEP52429 567 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 CXADRP78310 365 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 TIGD2Q4W5G0 525 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 PLA1AQ53H76 456 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 PLAG1Q6DJT9 500 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 RHOUQ7L0Q8 258 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 RNF44Q7L0R7 432 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 BEND5Q7L4P6 421 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 REXO4Q9GZR2 422 aaKnown RBP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 SSX2IPQ9Y2D8 614 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 NEU2Q9Y3R4 380 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLOCK-205ENST00000506747 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
CLOCK-205ENST00000506747 FER1L4A9Z1Z3 1794 aa4.9□□□□□ -1.62
CLOCK-205ENST00000506747 LOC102723971A0A1B0GUV8 181 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 GOLGA6L3A6NEY3 463 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TMEM200CA6NKL6 621 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 THAP12O43422 761 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 SOAT2O75908 522 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 NDST3O95803 873 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 GPANK1O95872 356 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 CSF1RP07333 972 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.63
CLOCK-205ENST00000506747 LAG3P18627 525 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 KCNA3P22001 575 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 GATA3P23771 443 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 ACVR2AP27037 513 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 BMPR1AP36894 532 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 ALDH9A1P49189 494 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 LOXL3P58215 753 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 LILRA4P59901 499 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 FHL3Q13643 280 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 ZNF750Q32MQ0 723 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TMEM95Q3KNT9 176 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 C4orf46Q504U0 113 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 SP5Q6BEB4 398 aaPredicted RBP4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TLDC1Q6P9B6 456 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.9□□□□□ -1.63
CLOCK-205ENST00000506747 SLC30A10Q6XR72 485 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 KCTD20Q7Z5Y7 419 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 RAPGEF4Q8WZA2 1011 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 ZG16BQ96DA0 208 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 CRAMP1Q96RY5 1269 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 OSBPL9Q96SU4 736 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 STK31Q9BXU1 1019 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 EIF2AQ9BY44 585 aaKnown RBP4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TRIM5Q9C035 493 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 NECTIN3Q9NQS3 549 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TM7SF3Q9NS93 570 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 IGSF9Q9P2J2 1179 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 RAD54BQ9Y620 910 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 CDY1Q9Y6F8 540 aa4.9□□□□□ -1.63
CLOCK-205ENST00000506747 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 OR2W5A6NFC9 320 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 HNRNPDLO14979 420 aaKnown RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 NPC1O15118 1278 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 DHHO43323 396 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 NCR1O76036 304 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 SPATA31D3P0C874 917 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 MYL4P12829 197 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 KRT4P19013 534 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 TECP42680 631 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 CPT1AP50416 773 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 VAV2P52735 878 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 COPAP53621 1224 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 ATXN1P54253 815 aaKnown RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 MYO1EQ12965 1108 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 ARHGEF7Q14155 803 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 PUM3Q15397 648 aaKnown RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 RRAGBQ5VZM2 374 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 Q6ZPA2 131 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 SPATA31D4Q6ZUB0 917 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 YAF2Q8IY57 180 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 SYTL1Q8IYJ3 562 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 CACNA2D3Q8IZS8 1091 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 FAM9AQ8IZU1 332 aaPredicted RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 MPP5Q8N3R9 675 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 ZNF566Q969W8 418 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 MOGAT1Q96PD6 335 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 AGAP2Q99490 1192 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 HERPUD2Q9BSE4 406 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 MLST8Q9BVC4 326 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 PTDSS2Q9BVG9 487 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 TTYH3Q9C0H2 523 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 CXorf36Q9H7Y0 433 aa4.89□□□□□ -1.63
CLOCK-205ENST00000506747 UNKLQ9H9P5 680 aaKnown RBP4.89□□□□□ -1.63
CLOCK-205ENST00000506747 AGO4Q9HCK5 861 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms