RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 THAP12O43422 761 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 PROM1O43490 865 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 RASAL1O95294 804 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 RHOP08100 348 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 CHRM2P08172 466 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 KRT4P19013 534 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 FGFR2P21802 821 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 IL1R2P27930 398 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 SERPINB3P29508 390 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 ACVRL1P37023 503 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 MPLP40238 635 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 FOLR3P41439 243 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 PTDSS1P48651 473 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 ITGA8P53708 1063 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 PRKAG1P54619 331 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 NXPH1P58417 271 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 BLOC1S1P78537 153 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 TAP1Q03518 808 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 ITIH3Q06033 890 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 FOXI1Q12951 378 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 ARHGEF7Q14155 803 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 BRD3Q15059 726 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 INSCQ1MX18 579 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 FCRL6Q6DN72 434 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 LAIR1Q6GTX8 287 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 MORC1Q86VD1 984 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 OR2C3Q8N628 320 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 BEND2Q8NDZ0 799 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 SUPT20HQ8NEM7 779 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 TMEM171Q8WVE6 324 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 IPCEF1Q8WWN9 437 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 TFAP2BQ92481 460 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 GJA10Q969M2 543 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 IQCDQ96DY2 449 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 PGBD1Q96JS3 809 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 GBA2Q9HCG7 927 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 NLRC4Q9NPP4 1024 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 DNMT3BQ9UBC3 853 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 ZNF212Q9UDV6 495 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 GRID2IPA4D2P6 1211 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 RGS10O43665 173 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 PEX14O75381 377 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 CSF1RP07333 972 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 HARSP12081 509 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 TGM1P22735 817 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ACVR2AP27037 513 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ADORA2AP29274 412 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 AVPR1BP47901 424 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 CPT1AP50416 773 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 SEC24CP53992 1094 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 FSTL1Q12841 308 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 PTPRRQ15256 657 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 TBCCQ15814 346 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ARL13BQ3SXY8 428 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 USP51Q70EK9 711 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 SLC15A3Q8IY34 581 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ACRBPQ8NEB7 543 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ATG4AQ8WYN0 398 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 LRRC46Q96FV0 321 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 SGCZQ96LD1 299 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 COQ10AQ96MF6 247 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 COLEC11Q9BWP8 271 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 SCAND2PQ9GZW5 306 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 KLC4Q9NSK0 619 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 MYO1AQ9UBC5 1043 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 DKK3Q9UBP4 350 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 CDY1Q9Y6F8 540 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 ADGRA2Q96PE1 1338 aa4.88□□□□□ -1.63
TOPBP1-204ENST00000505804 A0A1W2PPC4 97 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 TMEM191CA6NGB0 347 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 ADM5C9JUS6 153 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 MPPED1O15442 326 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 CCP110O43303 1012 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 RRP9O43818 475 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 FGF18O76093 207 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 ESRRBO95718 433 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 A1BGP04217 495 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 TPH1P17752 444 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 ADRA1BP35368 520 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 PLA2G5P39877 138 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 GDF5P43026 501 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 KLF10Q13118 480 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 MPP3Q13368 585 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 LY6KQ17RY6 165 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 ZNF750Q32MQ0 723 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 DEPDC1Q5TB30 811 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 IZUMO3Q5VZ72 239 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 KAZNQ674X7 775 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 KIAA0895LQ68EN5 471 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 PLAG1Q6DJT9 500 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 XRRA1Q6P2D8 792 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 MAVSQ7Z434 540 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 DTX2Q86UW9 622 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms