RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ZNF843Q8N446 348 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 PNPLA1Q8N8W4 532 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 MDGA1Q8NFP4 955 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CCDC148Q8NFR7 591 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 TSTD1Q8NFU3 115 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 OR2I1PQ8NGU4 316 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 HAS1Q92839 578 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 POM121Q96HA1 1249 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 SUSD3Q96L08 255 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CNOT6LQ96LI5 555 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 CAMK1GQ96NX5 476 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 FNBP1Q96RU3 617 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CCDC113Q9H0I3 377 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 SMG9Q9H0W8 520 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 EBF3Q9H4W6 596 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CAPN10Q9HC96 672 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 GPRC5CQ9NQ84 441 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 PRMT7Q9NVM4 692 aaPredicted RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 DDX25Q9UHL0 483 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 LRRIQ4A6NIV6 560 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 OPHN1O60890 802 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 GJB3O75712 270 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 LYPLA2O95372 231 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 OR4Q2P0C623 313 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 CPB1P15086 417 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 GABRR2P28476 465 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 P2RY2P41231 377 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 CYP4A11Q02928 519 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 HNRNPDQ14103 355 aaKnown RBP7.64□□□□□ -1.19
VCAN-206ENST00000505615 PTPAQ15257 358 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 XKR4Q5GH76 650 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 ANO7Q6IWH7 933 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 ARMCX6Q7L4S7 300 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 TMEFF1Q8IYR6 380 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
VCAN-206ENST00000505615 HDDC3Q8N4P3 179 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 TTC9BQ8N6N2 239 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 FRMD1Q8N878 549 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 PSMG2Q969U7 264 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 FAM20AQ96MK3 541 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 ZMAT2Q96NC0 199 aaKnown RBP7.64□□□□□ -1.19
VCAN-206ENST00000505615 PGLYRP2Q96PD5 576 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 P2RY13Q9BPV8 354 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 ATXN3LQ9H3M9 355 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 TASP1Q9H6P5 420 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 ZSWIM4Q9H7M6 989 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
VCAN-206ENST00000505615 PILRBQ9UKJ0 227 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 CCL26Q9Y258 94 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 LRRK2Q5S007 2527 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 SCN1AP35498 2009 aa7.64□□□□□ -1.19
VCAN-206ENST00000505615 MYLKQ15746 1914 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 J3QKU1 62 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 SH3BP5O60239 455 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 SOAT2O75908 522 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 SLITRK3O94933 977 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ITPKAP23677 461 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ITGB7P26010 798 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 GJA4P35212 333 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 HOXD12P35452 270 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 DGKGP49619 791 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 RARRES1P49788 294 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 EPHB3P54753 998 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 DUSP4Q13115 394 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 PLD1Q13393 1074 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 PRPF4BQ13523 1007 aaKnown RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 TRIP6Q15654 476 aaKnown RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 INF2Q27J81 1249 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 DCAF4L1Q3SXM0 396 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ARHGAP15Q53QZ3 475 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 NCAPH2Q6IBW4 605 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ALKAL1Q6UXT8 129 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 DNAJB7Q7Z6W7 309 aaPredicted RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 ZNF605Q86T29 641 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 SLCO6A1Q86UG4 719 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 MINDY1Q8N5J2 469 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 CEP120Q8N960 986 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 USP33Q8TEY7 942 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 RLN3Q8WXF3 142 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 HNRNPABQ99729 332 aaKnown RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 ADPGKQ9BRR6 497 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 GTPBP2Q9BX10 602 aaKnown RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 SLC46A2Q9BY10 475 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 RNF26Q9BY78 433 aaPredicted RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 C22orf23Q9BZE7 217 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 SH3GLB2Q9NR46 395 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ANKEF1Q9NU02 776 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 THG1LQ9NWX6 298 aaKnown RBP7.63□□□□□ -1.19
VCAN-206ENST00000505615 PCDHA4Q9UN74 947 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 SLC6A14Q9UN76 642 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 ASB3Q9Y575 518 aa7.63□□□□□ -1.19
VCAN-206ENST00000505615 COL5A1P20908 1838 aaPredicted RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 FLNCQ14315 2725 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 CCDC196A0A1B0GTZ2 297 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 MTMR11A4FU01 709 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms