RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 KIAA1958Q8N8K9 716 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 TTC16Q8NEE8 873 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CD101Q93033 1021 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 IKZF4Q9H2S9 585 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CUEDC2Q9H467 287 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 PCIF1Q9H4Z3 704 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 VPS45Q9NRW7 570 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-219ENST00000505207 ACACBO00763 2458 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 TRIM66O15016 1216 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 TCF3P15923 654 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 GRIK1P39086 918 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 PXNP49023 591 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 PSMD2Q13200 908 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 ZNF77Q15935 545 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 USP39Q53GS9 565 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 CYP2S1Q96SQ9 504 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 SNX25Q9H3E2 840 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 C2orf42Q9NWW7 574 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 EBF1Q9UH73 591 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 ARHGAP26Q9UNA1 814 aa11.89□□□□□ -0.51
UBE2D3-219ENST00000505207 CACNA1BQ00975 2339 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 TCHHQ07283 1943 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 RALGAPA1Q6GYQ0 2036 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 GDF9O60383 454 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 SYT1P21579 422 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 GNL1P36915 607 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 CASP5P51878 434 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 CYP27A1Q02318 531 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 RESTQ13127 1097 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 DMC1Q14565 340 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 STK38Q15208 465 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 EML3Q32P44 896 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 PKN3Q6P5Z2 889 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 CHFRQ96EP1 664 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 INTS4Q96HW7 963 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 FNBP1Q96RU3 617 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 WNT6Q9Y6F9 365 aa11.88□□□□□ -0.51
UBE2D3-219ENST00000505207 SDK1Q7Z5N4 2213 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 TNNI1P19237 187 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 BDNFP23560 247 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 MPLP40238 635 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 DGKEP52429 567 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 WNT7BP56706 349 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 TNNC1P63316 161 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 USP4Q13107 963 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 SF3A2Q15428 464 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 PLK5Q496M5 336 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 STPG1Q5TH74 334 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 LIMS2Q7Z4I7 341 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 OSTM1Q86WC4 334 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 PDILTQ8N807 584 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 IQUBQ8NA54 791 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 ZSWIM2Q8NEG5 633 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 TSTD1Q8NFU3 115 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 HHIPQ96QV1 700 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 FBRSL1Q9HCM7 1045 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 GCNT4Q9P109 453 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 TSC2P49815 1807 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 EPG5Q9HCE0 2579 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 ANK1P16157 1881 aa11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-219ENST00000505207 C2orf78A6NCI8 922 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms