RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SYN3O14994 580 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 FTCDO95954 541 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 ADORA2BP29275 332 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
TPM3-217ENST00000504663 FPGSQ05932 587 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 RTP2Q5QGT7 225 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
TPM3-217ENST00000504663 CYP4A22Q5TCH4 519 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 MEI1Q5TIA1 1274 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 OVOS1Q6IE37 1185 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 PPP1R2P3Q6NXS1 205 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 CLEC20AQ6ZU45 233 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 PHLDB2Q86SQ0 1253 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 TMEM110Q86TL2 294 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 NT5DC3Q86UY8 548 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
TPM3-217ENST00000504663 ABI1Q8IZP0 508 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 SLC39A11Q8N1S5 342 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 C3orf20Q8ND61 904 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 LRRN4CLQ8ND94 238 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
TPM3-217ENST00000504663 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 MYLPFQ96A32 169 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 TRIM11Q96F44 468 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 PCED1BQ96HM7 432 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 B3GALT6Q96L58 329 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 NAPGQ99747 312 aaPredicted RBP10.99□□□□□ -0.65
TPM3-217ENST00000504663 SMOQ99835 787 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 RHOBTB2Q9BYZ6 727 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 ZCWPW1Q9H0M4 648 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 UVRAGQ9P2Y5 699 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 DSEQ9UL01 958 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 MRFAP1Q9Y605 127 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 MYO16Q9Y6X6 1858 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 DDX3YO15523 660 aaKnown RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 PAPSS1O43252 624 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 GJB5O95377 273 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 CALB1P05937 261 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 SYN1P17600 705 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 CASQ1P31415 396 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 RGS7P49802 495 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 RABGGTBP53611 331 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 BCAT1P54687 386 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 RPL7AP62424 266 aaKnown RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 ADCY1Q08828 1119 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 BST2Q10589 180 aaKnown RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 DCAF12L1Q5VU92 463 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 FAM117BQ6P1L5 589 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 OLFML1Q6UWY5 402 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 FAM183BPQ6ZVS7 135 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 BHLHA9Q7RTU4 235 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 GPRIN1Q7Z2K8 1008 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 ERICH1Q86X53 443 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 JOSD2Q8TAC2 188 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 HERVK_113Q902F9 699 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 HES6Q96HZ4 224 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 ABHD8Q96I13 439 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 IGSF21Q96ID5 467 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 TNIP3Q96KP6 325 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 DUSP16Q9BY84 665 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 CSNK1G1Q9HCP0 422 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 CTTNBP2NLQ9P2B4 639 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 ZMYND8Q9ULU4 1186 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 PACSIN2Q9UNF0 486 aaPredicted RBP10.98□□□□□ -0.65
TPM3-217ENST00000504663 FAN1Q9Y2M0 1017 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 HYOU1Q9Y4L1 999 aa10.98□□□□□ -0.65
TPM3-217ENST00000504663 TMEM191CA6NGB0 347 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 XPO1O14980 1071 aaKnown RBP10.97□□□□□ -0.65
TPM3-217ENST00000504663 ARHGEF15O94989 841 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 NPR3P17342 541 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 PCSK1P29120 753 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 MARCKSL1P49006 195 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 CDR1P51861 262 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 RAB41Q5JT25 222 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 FAM171A1Q5VUB5 890 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 PSRC1Q6PGN9 363 aaPredicted RBP10.97□□□□□ -0.65
TPM3-217ENST00000504663 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 CLEC4CQ8WTT0 213 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 COLEC11Q9BWP8 271 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 CRISPLD1Q9H336 500 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 KRT82Q9NSB4 513 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 TMEM59LQ9UK28 342 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 JRKLQ9Y4A0 524 aa10.97□□□□□ -0.65
TPM3-217ENST00000504663 SF3B1O75533 1304 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM3-217ENST00000504663 LCHNA4D1U4 455 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms