RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MAP3K7CLP57077 242 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 COL19A1Q14993 1142 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 DENND1BQ6P3S1 775 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 C2orf15Q8WU43 125 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 SMOQ99835 787 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 PLEKHA4Q9H4M7 779 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 FAM124BQ9H5Z6 455 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 HCFC1R1Q9NWW0 138 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 MYH10P35580 1976 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 F8VP50 259 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 TULP2O00295 520 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 O00370 1275 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 MICAL2O94851 1124 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ADCY5O95622 1261 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 LRG1P02750 347 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 GYPCP04921 128 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 KCNA5P22460 613 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ALDH1A3P47895 512 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 NTHL1P78549 312 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 PTK2Q05397 1052 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 MTMR3Q13615 1198 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 CFAP221Q4G0U5 840 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ARHGAP17Q68EM7 881 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 SPECC1LQ69YQ0 1117 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 TTC30AQ86WT1 665 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ZMIZ2Q8NF64 920 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 HDAC7Q8WUI4 952 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 SLC20A1Q8WUM9 679 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ZNF606Q8WXB4 792 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ZNF707Q96C28 371 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 NUP58Q9BVL2 599 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 DNAI2Q9GZS0 605 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 UBE2ZQ9H832 354 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 DZANK1Q9NVP4 752 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 TSPAN16Q9UKR8 245 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 ITIH6Q6UXX5 1313 aa14.06□□□□□ -0.16
PDLIM7-212ENST00000504380 DOCK6Q96HP0 2047 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 NCK2O43639 380 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 C1RP00736 705 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 CASP14P31944 242 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 MAGEA11P43364 429 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 TUFMP49411 452 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 CNGA2Q16280 664 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 FIGNQ5HY92 759 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 PASD1Q8IV76 773 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 SMARCD1Q96GM5 515 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 DUSP16Q9BY84 665 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 PRKD2Q9BZL6 878 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 S1PR5Q9H228 398 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 SFXN1Q9H9B4 322 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 KIAA1257Q9ULG3 409 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 MAFFQ9ULX9 164 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 CAPN11Q9UMQ6 739 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.05□□□□□ -0.165e-7■□□□□ 8.3
PDLIM7-212ENST00000504380 ATP8B3O60423 1300 aa14.05□□□□□ -0.16
PDLIM7-212ENST00000504380 SLC38A8A6NNN8 435 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 M0QYV0 167 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 NRG2O14511 850 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 MMEP08473 750 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 SRGAP2BP0DMP2 458 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 SKILP12757 684 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 CYP11B1P15538 503 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 CHRNB2P17787 502 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 ANXA13P27216 316 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 EPHB3P54753 998 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 TFF2Q03403 129 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 PDE4CQ08493 712 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 IFRD2Q12894 506 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 ASIC2Q16515 512 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 SFMBT2Q5VUG0 894 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 LCLAT1Q6UWP7 414 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 VSTM1Q6UX27 236 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 CLEC20AQ6ZU45 233 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 GPRIN1Q7Z2K8 1008 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 GRASPQ7Z6J2 395 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 ANKRD52Q8NB46 1076 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 SMG7Q92540 1137 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 SECISBP2LQ93073 1101 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 HLA-CQ95604 372 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 MRFAP1L1Q96HT8 127 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms