RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GNASQ5JWF2 1037 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 GPR63Q9BZJ6 419 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 MTMR12Q9C0I1 747 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 PJA2O43164 708 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 ADCY3O60266 1144 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 MTM1Q13496 603 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 TRIP10Q15642 601 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 NTRK3Q16288 839 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 FBXL16Q8N461 479 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC16A10Q8TF71 515 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 ACSF2Q96CM8 615 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 DDIT4Q9NX09 232 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 TBC1D4O60343 1298 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 GLRA3O75311 464 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 HLA-DPA1P20036 260 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 DNAJC9Q8WXX5 260 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 AGXT2Q9BYV1 514 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 F9P00740 461 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 HERVK_113P62684 666 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 DNAJC3Q13217 504 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 LRRC36Q1X8D7 754 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 IFNEQ86WN2 208 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 C4orf19Q8IY42 314 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 NWD1Q149M9 1564 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 E2F8A0AVK6 867 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 F8VZ95 297 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 RHOBTB1O94844 696 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 LSM8O95777 96 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 NFIAQ12857 509 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 DMC1Q14565 340 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 STX19Q8N4C7 294 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 SNX31Q8N9S9 440 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 CDV3Q9UKY7 258 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
PCDHA1-203ENST00000504120 IRF1P10914 325 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 TDRD10Q5VZ19 366 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 CDR2LQ86X02 465 aaPredicted RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 FUT8Q9BYC5 575 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 DCDC2Q9UHG0 476 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 RGL2O15211 777 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 H2AFYO75367 372 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 SOAT2O75908 522 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 APOA1P02647 267 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 TGM2P21980 687 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 BACE1P56817 501 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 TNIP2Q8NFZ5 429 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC24A3Q9HC58 644 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 CHRM3P20309 590 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 NAT9Q9BTE0 207 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 OLFML3Q9NRN5 406 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ETFBP38117 255 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ALDH1A3P47895 512 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC26A2P50443 739 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 SEZ6Q53EL9 994 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ZRANB3Q5FWF4 1079 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 LRRC34Q8IZ02 419 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 THAP11Q96EK4 314 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 FUCA2Q9BTY2 467 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 PACSIN1Q9BY11 444 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ILKAPQ9H0C8 392 aaPredicted RBP17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 ZNF556Q9HAH1 456 aa17.16■□□□□ 0.34
PCDHA1-203ENST00000504120 COPAP53621 1224 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 KBTBD12Q3ZCT8 623 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 UGT3A1Q6NUS8 523 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 ATG4AQ8WYN0 398 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM111AQ96PZ2 611 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 RPS6KL1Q9Y6S9 549 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 EFCAB14O75071 495 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 PROSCO94903 275 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 CYP24A1Q07973 514 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 ITIH4Q14624 930 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 PKN1Q16512 942 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 AGAP9Q5VTM2 703 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 FBXO36Q8NEA4 188 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 EXD1Q8NHP7 514 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 ZKSCAN4Q969J2 545 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 CINPQ9BW66 212 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 ITM2BQ9Y287 266 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 PXDNQ92626 1479 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 KCNA3P22001 575 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 MAGEB18Q96M61 343 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 PHTF1Q9UMS5 762 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 SDR42E2A6NKP2 422 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 AP1G2O75843 785 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 AKAP3O75969 853 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms