RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CSGALNACT2Q8N6G5 542 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 MYCBPAPQ8TBZ2 947 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 OVCA2Q8WZ82 227 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 OTUB2Q96DC9 234 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ANKRD36BP1Q96IX9 119 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 CNOT6LQ96LI5 555 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM213AQ9BRX8 229 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 PI4K2AQ9BTU6 479 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 DUSP15Q9H1R2 295 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ARRDC1-AS1Q9H2J1 176 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TNMDQ9H2S6 317 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ZHX3Q9H4I2 956 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ZSCAN16Q9H4T2 348 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 VRTNQ9H8Y1 702 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 COMMD8Q9NX08 183 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 DUS2Q9NX74 493 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TBC1D7Q9P0N9 293 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 MAGEC2Q9UBF1 373 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SIX4Q9UIU6 781 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 GTF3C4Q9UKN8 822 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ANGPTL2Q9UKU9 493 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 AGAP1Q9UPQ3 857 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 THADAQ6YHU6 1953 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TPRP12270 2363 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 ACACBO00763 2458 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 UBE4BO95155 1302 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM92AA1XBS5 289 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 BCLAF3A2AJT9 711 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ZNF233A6NK53 670 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 GDF9O60383 454 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PPP6R2O75170 966 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 GCNT3O95395 438 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 OAS1P00973 400 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CKMP06732 381 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 TMEM191BP0C7N4 346 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ATXN8OSP0DMR3 200 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CCDC192P0DO97 292 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 HDCP19113 662 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CSRP1P21291 193 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CYP2F1P24903 491 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ATICP31939 592 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 HOXD12P35452 270 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 IFNAR2P48551 515 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 NASPP49321 788 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 TUBP50607 506 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 DGKEP52429 567 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 WNT7BP56706 349 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 TFAMQ00059 246 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 KCNA1Q09470 495 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 SRSF5Q13243 272 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 DMC1Q14565 340 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 KCNB1Q14721 858 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ELF2Q15723 593 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 LPAL2Q16609 132 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ST3GAL2Q16842 350 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 DUOXA2Q1HG44 320 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PREPLQ4J6C6 727 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 AASDHQ4L235 1098 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 USP39Q53GS9 565 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 STPG1Q5TH74 334 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PEAR1Q5VY43 1037 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PMS2CLQ68D20 193 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 HEATR6Q6AI08 1181 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 TRIM68Q6AZZ1 485 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PKN3Q6P5Z2 889 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 USP49Q70CQ1 688 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 EPM2AIP1Q7L775 607 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 DYMQ7RTS9 669 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 OSTM1Q86WC4 334 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 DDX42Q86XP3 938 aaKnown RBP eCLIP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 C12orf56Q8IXR9 622 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CCDC65Q8IXS2 484 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ADGRF2Q8IZF7 708 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ADGRG2Q8IZP9 1017 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 SYCP3Q8IZU3 236 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PDZD8Q8NEN9 1154 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 OLIG1Q8TAK6 271 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 RIN3Q8TB24 985 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ZNF507Q8TCN5 953 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 USP33Q8TEY7 942 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 KBTBD7Q8WVZ9 684 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 HPDLQ96IR7 371 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CBWD1Q9BRT8 395 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 FBRSL1Q9HCM7 1045 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 PANK4Q9NVE7 773 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 IL37Q9NZH6 218 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 TBC1D14Q9P2M4 693 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 EVLQ9UI08 416 aaPredicted RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 MMP17Q9ULZ9 603 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 R3HCC1Q9Y3T6 440 aaKnown RBP6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 SNX9Q9Y5X1 595 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 CLIC4Q9Y696 253 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms