RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RASAL1O95294 804 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 TSPAN15O95858 294 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SPATA31D3P0C874 917 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SRGAP2BP0DMP2 458 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 PAPOLAP51003 745 aaKnown RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 ZNF134P52741 427 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 PNLIPRP1P54315 467 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 EPHB4P54760 987 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 ALDH18A1P54886 795 aaKnown RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 NT5DC1Q5TFE4 455 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 MANEALQ5VSG8 457 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 TCERG1LQ5VWI1 586 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 TSHZ3Q63HK5 1081 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 METRNLQ641Q3 311 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLFN13Q68D06 897 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SPATA31D4Q6ZUB0 917 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RSRC2Q7L4I2 434 aaKnown RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 C2CD5Q86YS7 1000 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RASGRP3Q8IV61 690 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 HERC6Q8IVU3 1022 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC44A2Q8IWA5 706 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RHOT2Q8IXI1 618 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 NME8Q8N427 588 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 MB21D1Q8N884 522 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SIMC1Q8NDZ2 872 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 BHLHE22Q8NFJ8 381 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RSC1A1Q92681 617 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 PPP2R3CQ969Q6 453 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RILPL2Q969X0 211 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 LRIG1Q96JA1 1093 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 MEGF9Q9H1U4 602 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC25A32Q9H2D1 315 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 UNC45AQ9H3U1 944 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 SEPSECSQ9HD40 501 aaKnown RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 WASH6PQ9NQA3 447 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 PRDM8Q9NQV8 689 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 VSX1Q9NZR4 365 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 LPAR3Q9UBY5 353 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 FEM1BQ9UK73 627 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 OR2W5A6NFC9 320 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 PCDH17O14917 1159 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 FAM163BP0C2L3 166 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 KCNA3P22001 575 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 BCAT1P54687 386 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 HYIQ5T013 277 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 FAM102AQ5T9C2 384 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 ATPAF1Q5TC12 328 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 AGAP9Q5VTM2 703 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 TMTC1Q8IUR5 882 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 ESX1Q8N693 406 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 SCAMP5Q8TAC9 235 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 THAP4Q8WY91 577 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 MIEF2Q96C03 454 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 GRAMD1AQ96CP6 724 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 MED15Q96RN5 788 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 TMX4Q9H1E5 349 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 SMOC2Q9H3U7 446 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 EPS8L2Q9H6S3 715 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 VPS45Q9NRW7 570 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 CTTNBP2NLQ9P2B4 639 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 HSFX1Q9UBD0 423 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC13A4Q9UKG4 626 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 SCINQ9Y6U3 715 aa6.11□□□□□ -1.43
HMGB1P3-201ENST00000502802 E7ENX8 843 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 hCG_1984214I3L0E3 225 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 SRGAP2O75044 1071 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 VIPP01282 170 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 ANXA6P08133 673 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 XBP1P17861 261 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 MSX2P35548 267 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 PRKAG1P54619 331 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 NHLH2Q02577 135 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 TAP2Q03519 686 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 SCAPQ12770 1279 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 FOXL1Q12952 345 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 MYO1EQ12965 1108 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 CUL4BQ13620 913 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 ATP1A4Q13733 1029 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 PTCHD3Q3KNS1 767 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 TMEM108Q6UXF1 575 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 NRSN1Q8IZ57 195 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 SPARTQ8N0X7 666 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 OR6Y1Q8NGX8 325 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 ZNF483Q8TF39 744 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 AFG1LQ8WV93 481 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 HERVK_113Q902F9 699 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 SDCCAG3Q96C92 435 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 MAELQ96JY0 434 aaKnown RBP6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 ZNF668Q96K58 619 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 GNRHR2Q96P88 292 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 NEU1Q99519 415 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 PTDSS2Q9BVG9 487 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC26A6Q9BXS9 759 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 TRIM5Q9C035 493 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 TAF1DQ9H5J8 278 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 MRPS17Q9Y2R5 130 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms