RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 HIF1AQ16665 826 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 TAF2Q6P1X5 1199 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 MAMDC4Q6UXC1 1216 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 BBS12Q6ZW61 710 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 TDRPQ86YL5 185 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 SPDYE1Q8NFV5 336 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 KRT35Q92764 455 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 CDKL2Q92772 493 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 ATP2A3Q93084 1043 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 RAB3IPQ96QF0 476 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 RBM15Q96T37 977 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 CDT1Q9H211 546 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 CCDC134Q9H6E4 229 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 RBPJLQ9UBG7 517 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 NEU2Q9Y3R4 380 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 RAD54BQ9Y620 910 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 MANSC4A6NHS7 340 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 TRAPPC3O43617 180 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 FBXO21O94952 628 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 VNN1O95497 513 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 MSH2P43246 934 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 ARSEP51690 589 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 SESN3P58005 492 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 PRAMEF18Q5VWM3 479 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 TAS1R3Q7RTX0 852 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 B4GALNT2Q8NHY0 566 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 MYCBPAPQ8TBZ2 947 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 SOCS4Q8WXH5 440 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF516Q92618 1163 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 USP6NLQ92738 828 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 HSFY1Q96LI6 401 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 SLITRK1Q96PX8 696 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 NAT9Q9BTE0 207 aa7.76□□□□□ -1.17
PDGFC-203ENST00000502773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDGFC-203ENST00000502773 MYH10P35580 1976 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 APOC4-APOC2K7ER74 178 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 APOC2P02655 101 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ATP5BP06576 529 aaKnown RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 MBTD1Q05BQ5 628 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 PTPROQ16827 1216 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ARL13BQ3SXY8 428 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 DARS2Q6PI48 645 aaKnown RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 MTHFD1LQ6UB35 978 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 CRELD2Q6UXH1 353 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ARCQ7LC44 396 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 METTL23Q86XA0 190 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 DDX42Q86XP3 938 aaKnown RBP eCLIP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 PASD1Q8IV76 773 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 RIN2Q8WYP3 895 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 RNF25Q96BH1 459 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 CYTH2Q99418 400 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 RCOR3Q9P2K3 495 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ADGRA3Q8IWK6 1321 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 GLTPD2A6NH11 291 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 HACD1B0YJ81 288 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 GOLGA8SH3BPF8 625 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 APOL1O14791 398 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 KRT37O76014 449 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ZWINTO95229 277 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 IFNB1P01574 187 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ATP4AP20648 1035 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 DNAJB2P25686 324 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 MMP13P45452 471 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 SERPINB9P50453 376 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF143P52747 638 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 BCAT1P54687 386 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 CDK16Q00536 496 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 GPS1Q13098 491 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 MTA1Q13330 715 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LCLAT1Q6UWP7 414 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 TRIM50Q86XT4 487 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ALLCQ8N6M5 410 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 SLC4A11Q8NBS3 891 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 SAYSD1Q9NPB0 183 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 PSMC3IPQ9P2W1 217 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LGALS13Q9UHV8 139 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 H7C0C1 242 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 PDHXO00330 501 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LIASO43766 372 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 DCTN3O75935 186 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 CNTFP26441 200 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ADORA2AP29274 412 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ATP5OP48047 213 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 SP2Q02086 613 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 XRCC4Q13426 336 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 GRIK4Q16099 956 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 FAM102AQ5T9C2 384 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 KAZNQ674X7 775 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LMBRD2Q68DH5 695 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 SDCCAG8Q86SQ7 713 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 LRRC71Q8N4P6 559 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 ZBTB45Q96K62 511 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-203ENST00000502773 CD248Q9HCU0 757 aa7.75□□□□□ -1.17
PDGFC-203ENST00000502773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-203ENST00000502773 TRDMT1O14717 391 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms