RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 TTLL3Q9Y4R7 772 aa6.88□□□□□ -1.31
PMPCB-208ENST00000498530 CDY1Q9Y6F8 540 aa6.88□□□□□ -1.31
PMPCB-208ENST00000498530 CDHR4A6H8M9 788 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 TBKBP1A7MCY6 615 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 HOXA3O43365 443 aaPredicted RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 DNPH1O43598 174 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 MAN2A2P49641 1150 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 CLNS1AP54105 237 aaKnown RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 BCAT1P54687 386 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 NAP1L1P55209 391 aaKnown RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 CAP1Q01518 475 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 NUCB1Q02818 461 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 MGAT5BQ3V5L5 792 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 GPRIN1Q7Z2K8 1008 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 RASGRP3Q8IV61 690 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 USP38Q8NB14 1042 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 PDPRQ8NCN5 879 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 ADAMTS15Q8TE58 950 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 RRP36Q96EU6 259 aaKnown RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 COG8Q96MW5 612 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 TRAPPC9Q96Q05 1148 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 SLC46A2Q9BY10 475 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 TMEM168Q9H0V1 697 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 EPB41L4BQ9H329 900 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 TAF1DQ9H5J8 278 aaPredicted RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 GCM1Q9NP62 436 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 NSMCE4AQ9NXX6 385 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 DAPP1Q9UN19 280 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 C19orf53Q9UNZ5 99 aaPredicted RBP6.87□□□□□ -1.31
PMPCB-208ENST00000498530 SHOC2Q9UQ13 582 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 TBC1D30Q9Y2I9 924 aa6.87□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A18PA6NE21 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A16PA6NEW6 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A9PA6NNJ1 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A5PA8MXJ8 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 BIN1O00499 593 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 DCLK1O15075 740 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 VIPP01282 170 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ATXN1LP0C7T5 689 aaKnown RBP6.86□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A15PP0C7V4 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 FAM90A14PP0C7W9 464 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ARP10275 920 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 RAP2BP61225 183 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 SLC12A1Q13621 1099 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 IQCB1Q15051 598 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 MANEALQ5VSG8 457 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 AGAP9Q5VTM2 703 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 CCDC30Q5VVM6 783 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ANKS6Q68DC2 871 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 KRT77Q7Z794 578 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 TCP11L2Q8N4U5 519 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 SLC17A8Q8NDX2 589 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ZMIZ2Q8NF64 920 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ZFP28Q8NHY6 868 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ZDHHC12Q96GR4 267 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
PMPCB-208ENST00000498530 ZNF668Q96K58 619 aaPredicted RBP6.86□□□□□ -1.31
PMPCB-208ENST00000498530 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 GPR63Q9BZJ6 419 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 SLC25A32Q9H2D1 315 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 SMYD2Q9NRG4 433 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 IRAK4Q9NWZ3 460 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 NCDNQ9UBB6 729 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 AASSQ9UDR5 926 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 HPSEQ9Y251 543 aa6.86□□□□□ -1.31
PMPCB-208ENST00000498530 CCER2I3L3R5 266 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 PIAS2O75928 621 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 GFPT2O94808 682 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 LRPAP1P30533 357 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 TOB1P50616 345 aaPredicted RBP6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ACAP1Q15027 740 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 SMAD1Q15797 465 aaKnown RBP6.85□□□□□ -1.31
PMPCB-208ENST00000498530 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ATXN7L2Q5T6C5 722 aaPredicted RBP6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ITPRIPL1Q6GPH6 555 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ABLIM2Q6H8Q1 611 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 RALYLQ86SE5 291 aaKnown RBP6.85□□□□□ -1.31
PMPCB-208ENST00000498530 CPT1CQ8TCG5 803 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ST8SIA4Q92187 359 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 NUDT22Q9BRQ3 303 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 IMPG2Q9BZV3 1241 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ZCWPW1Q9H0M4 648 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 MRPS18AQ9NVS2 196 aaKnown RBP6.85□□□□□ -1.31
PMPCB-208ENST00000498530 NDUFAF4Q9P032 175 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 NTMQ9P121 344 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 VPS51Q9UID3 782 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 TBX20Q9UMR3 447 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 CLCA2Q9UQC9 943 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 JAG2Q9Y219 1238 aa6.85□□□□□ -1.31
PMPCB-208ENST00000498530 ZNF503-AS2A6NEH8 195 aa6.84□□□□□ -1.31
PMPCB-208ENST00000498530 PGPEP1LA6NFU8 196 aa6.84□□□□□ -1.31
PMPCB-208ENST00000498530 CCNT2O60583 730 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms