RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 KIAA1324LA8MWY0 1029 aaPredicted RBP9.29□□□□□ -0.92
SNX13-212ENST00000498463 E7EVH7 732 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 PIAS2O75928 621 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 TMEM63AO94886 807 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 VIPP01282 170 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 ARP10275 920 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 ZNF28P17035 718 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 CDR1P51861 262 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 TERF1P54274 439 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 CLRN1P58418 232 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 SPECC1Q5M775 1068 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 PRR31Q5SQ13 230 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 RINT1Q6NUQ1 792 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 ENOSF1Q7L5Y1 443 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 ZNF605Q86T29 641 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 OR14K1Q8NGZ2 314 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 GRAMD1AQ96CP6 724 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 TIGD1Q96MW7 591 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 MOGAT1Q96PD6 335 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 IMPG2Q9BZV3 1241 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 VPS16Q9H269 839 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 CHODLQ9H9P2 273 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 NOD2Q9HC29 1040 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 NKIRAS2Q9NYR9 191 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 TMOD4Q9NZQ9 345 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 DNMT3BQ9UBC3 853 aaKnown RBP9.29□□□□□ -0.92
SNX13-212ENST00000498463 CDY1Q9Y6F8 540 aa9.29□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A9PA6NNJ1 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 J3KTA2 159 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 DOK2O60496 412 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 PPP6R2O75170 966 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 POLD2P49005 469 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX13-212ENST00000498463 GPS1Q13098 491 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 MRPL49Q13405 166 aaKnown RBP9.28□□□□□ -0.92
SNX13-212ENST00000498463 ATP1A4Q13733 1029 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 GRM4Q14833 912 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 ANKRD1Q15327 319 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 ZNF750Q32MQ0 723 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 C1QTNF12Q5T7M4 302 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 MANEALQ5VSG8 457 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 Q6ZUG5 572 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 CHD1LQ86WJ1 897 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 PDPRQ8NCN5 879 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 GPHA2Q96T91 129 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 ABHD16BQ9H3Z7 469 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 SIRT5Q9NXA8 310 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 DNAJC16Q9Y2G8 782 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 DERAQ9Y315 318 aa9.28□□□□□ -0.92
SNX13-212ENST00000498463 B5MCH6 92 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 POMCP01189 267 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
SNX13-212ENST00000498463 MYCLP12524 364 aaPredicted RBP9.27□□□□□ -0.93
SNX13-212ENST00000498463 PTMSP20962 102 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 SSTR4P31391 388 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 HGFACQ04756 655 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 SMAD1Q15797 465 aaKnown RBP9.27□□□□□ -0.93
SNX13-212ENST00000498463 ANKS6Q68DC2 871 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 FAM227BQ96M60 508 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 AP1M1Q9BXS5 423 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 SLC46A2Q9BY10 475 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 TTYH3Q9C0H2 523 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 BRD8Q9H0E9 1235 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 ACAD9Q9H845 621 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 L2HGDHQ9H9P8 463 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 FAM30AQ9NZY2 134 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 CNPY2Q9Y2B0 182 aa9.27□□□□□ -0.93
SNX13-212ENST00000498463 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 DCLK1O15075 740 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 SPTLC2O15270 562 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 CCNT2O60583 730 aaKnown RBP9.26□□□□□ -0.93
SNX13-212ENST00000498463 VPS4BO75351 444 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 RASAL1O95294 804 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 CHMP24386 653 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
SNX13-212ENST00000498463 CCT4P50991 539 aaKnown RBP9.26□□□□□ -0.93
SNX13-212ENST00000498463 CCR9P51686 369 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 NPEPPSP55786 919 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 UBXN2BQ14CS0 331 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 IQCB1Q15051 598 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 ABLIM2Q6H8Q1 611 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 USP30Q70CQ3 517 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 B4GALNT4Q76KP1 1039 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 ANKRD23Q86SG2 305 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 ZNF280BQ86YH2 543 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms