RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 HUS1O60921 280 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 TOP3BO95985 862 aaKnown RBP17.24■□□□□ 0.35
MUC1-220ENST00000498431 PROS1P07225 676 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 SPINK2P20155 84 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 DDIT3P35638 169 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 LONP1P36776 959 aaKnown RBP17.24■□□□□ 0.35
MUC1-220ENST00000498431 SEC13P55735 322 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 GAB4Q2WGN9 574 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 PMS2CLQ68D20 193 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 BRSK2Q8IWQ3 736 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 SCN4BQ8IWT1 228 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
MUC1-220ENST00000498431 USP33Q8TEY7 942 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 EPSTI1Q96J88 318 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 TBC1D7Q9P0N9 293 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 SIX4Q9UIU6 781 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 WASF3Q9UPY6 502 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 DMXL2Q8TDJ6 3036 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 FAM208BQ5VWN6 2430 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 GOLGA8IPA6NC78 632 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 GOLGA8JA6NMD2 632 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 K7EQS6 105 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 ATP2C2O75185 946 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 OPRD1P41143 372 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 MYL7Q01449 175 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 ZNF252P-AS1Q0IIN9 211 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 POSTNQ15063 836 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 CFAP221Q4G0U5 840 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 C2orf27AQ580R0 203 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 ANO7Q6IWH7 933 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 SPATA2LQ8IUW3 424 aaPredicted RBP17.23■□□□□ 0.35
MUC1-220ENST00000498431 SFTPA1Q8IWL2 248 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 TMEM86AQ8N2M4 240 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 CSGALNACT2Q8N6G5 542 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 TSTD1Q8NFU3 115 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 EXOC4Q96A65 974 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 FGFBP2Q9BYJ0 223 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 GDAP2Q9NXN4 497 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 SNX9Q9Y5X1 595 aa17.23■□□□□ 0.35
MUC1-220ENST00000498431 CDX4O14627 284 aaPredicted RBP17.22■□□□□ 0.35
MUC1-220ENST00000498431 GABRDO14764 452 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 HNRNPLP14866 589 aaKnown RBP eCLIP17.22■□□□□ 0.35
MUC1-220ENST00000498431 CASP5P51878 434 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 USP46P62068 366 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 FOXC1Q12948 553 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 KCNB1Q14721 858 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
MUC1-220ENST00000498431 SOWAHAQ2M3V2 549 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 L1TD1Q5T7N2 865 aaKnown RBP17.22■□□□□ 0.35
MUC1-220ENST00000498431 SH3PXD2AQ5TCZ1 1133 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 UNQ6494/PRO21346Q6UXR6 183 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 RASSF3Q86WH2 238 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 CCDC33Q8N5R6 958 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 LRRC52Q8N7C0 313 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
MUC1-220ENST00000498431 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
MUC1-220ENST00000498431 RBAKQ9NYW8 714 aaPredicted RBP17.22■□□□□ 0.35
MUC1-220ENST00000498431 ZFYVE26Q68DK2 2539 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 NBEAQ8NFP9 2946 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 MYMKA6NI61 221 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 KRT19P08727 400 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 TCF3P15923 654 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 HDCP19113 662 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 LMO2P25791 158 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.35
MUC1-220ENST00000498431 MESP2Q0VG99 397 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 C8orf34Q49A92 452 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 USP39Q53GS9 565 aaKnown RBP17.21■□□□□ 0.35
MUC1-220ENST00000498431 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
MUC1-220ENST00000498431 FAM171BQ6P995 826 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 MDGA1Q8NFP4 955 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 DNAJC19Q96DA6 116 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 ACCSQ96QU6 501 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 CBWD1Q9BRT8 395 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 ITGA11Q9UKX5 1188 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 ZMIZ1Q9ULJ6 1067 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 ARHGAP26Q9UNA1 814 aa17.21■□□□□ 0.35
MUC1-220ENST00000498431 DSPP15924 2871 aaKnown RBP17.21■□□□□ 0.35
MUC1-220ENST00000498431 PTPRJQ12913 1337 aa17.21■□□□□ 0.34
MUC1-220ENST00000498431 SCAMP3O14828 347 aaKnown RBP17.2■□□□□ 0.34
MUC1-220ENST00000498431 GCNT3O95395 438 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 NFATC1O95644 943 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
MUC1-220ENST00000498431 PCSK1P29120 753 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 MAGEA11P43364 429 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 LHX1P48742 406 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 IRX4P78413 519 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 NR1H3Q13133 447 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 RABEP1Q15276 862 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 TMEM92Q6UXU6 159 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 CYP2U1Q7Z449 544 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
MUC1-220ENST00000498431 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
MUC1-220ENST00000498431 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms