RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 TMEM74BQ9NUR3 256 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 PCDHB6Q9Y5E3 794 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 GON4LQ3T8J9 2241 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 C2orf78A6NCI8 922 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 ANTXRLA6NF34 631 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 LAD1O00515 517 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 NOL4O94818 638 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 FAM13AO94988 1023 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 KLF8O95600 359 aaPredicted RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 PLA2G4BP0C869 781 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 ITPKAP23677 461 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 CYP2F1P24903 491 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 NEK4P51957 841 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 SLC12A3P55017 1021 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 MRPS21P82921 87 aaKnown RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 SEMA3BQ13214 749 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 ZC2HC1CQ53FD0 456 aaPredicted RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 SLC23A3Q6PIS1 610 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 PIP4P1Q86T03 277 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 PDZD3Q86UT5 571 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 FRMD1Q8N878 549 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 FNBP1Q96RU3 617 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 LINC00597Q9H2U6 94 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 MBD1Q9UIS9 605 aaPredicted RBP12.54□□□□□ -0.4
CDK9-205ENST00000498339 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
CDK9-205ENST00000498339 A0A0B4J269 797 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 TCRBV21S2A2A0A5A6 115 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 MYMKA6NI61 221 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 AP5Z1O43299 807 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 APODP05090 189 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 ADRB2P07550 413 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 HDCP19113 662 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 OPRD1P41143 372 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 PDE6CP51160 858 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 MYL7Q01449 175 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 KDSRQ06136 332 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 ST3GAL1Q11201 340 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 SCAPQ12770 1279 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 EOGTQ5NDL2 527 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 SPATA2LQ8IUW3 424 aaPredicted RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 OLIG1Q8TAK6 271 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 ASB7Q9H672 318 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 DDX43Q9NXZ2 648 aaKnown RBP12.53□□□□□ -0.4
CDK9-205ENST00000498339 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 SLC6A14Q9UN76 642 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
CDK9-205ENST00000498339 SGK1O00141 431 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
CDK9-205ENST00000498339 HUS1O60921 280 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PIGRP01833 764 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK9-205ENST00000498339 PRPHP41219 470 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PNPLA4P41247 253 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 FAM193AP78312 1265 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 RESTQ13127 1097 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 IL17AQ16552 155 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 INTS6LQ5JSJ4 861 aaKnown RBP12.52□□□□□ -0.41
CDK9-205ENST00000498339 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 FBXO18Q8NFZ0 1043 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 LEO1Q8WVC0 666 aaPredicted RBP12.52□□□□□ -0.41
CDK9-205ENST00000498339 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 CCSER1Q9C0I3 900 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
CDK9-205ENST00000498339 PARVGQ9HBI0 331 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 ABCB6Q9NP58 842 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 AGO2Q9UKV8 859 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms