RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZNF507Q8TCN5 953 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 MYLPFQ96A32 169 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 DHX58Q96C10 678 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 SYT15Q9BQS2 421 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 GZF1Q9H116 711 aaPredicted RBP19.85■□□□□ 0.77
PRKCB-209ENST00000498058 TRPC7Q9HCX4 862 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 SEMA4GQ9NTN9 838 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 WNT6Q9Y6F9 365 aa19.85■□□□□ 0.77
PRKCB-209ENST00000498058 ANTXRLA6NF34 631 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 KIAA0391O15091 583 aaKnown RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 GDF9O60383 454 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 PPP6R2O75170 966 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 PDGFRBP09619 1106 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 PCSK1P29120 753 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 CNR2P34972 360 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 GJA4P35212 333 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 USP46P62068 366 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 FAM160A1Q05DH4 1040 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 EHHADHQ08426 723 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 USP4Q13107 963 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 PKP1Q13835 747 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 FOXD4L5Q5VV16 416 aaPredicted RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 ARL14EPQ8N8R7 260 aaPredicted RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 RDH13Q8NBN7 331 aa19.84■□□□□ 0.77
PRKCB-209ENST00000498058 FOXD4L4Q8WXT5 416 aaPredicted RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 FUBP3Q96I24 572 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 MRPL45Q9BRJ2 306 aaKnown RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 UXTQ9UBK9 157 aaPredicted RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 CDV3Q9UKY7 258 aaKnown RBP19.84■□□□□ 0.77
PRKCB-209ENST00000498058 CLIC2O15247 247 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 RNF40O75150 1001 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 WARSP23381 471 aaKnown RBP19.83■□□□□ 0.77
PRKCB-209ENST00000498058 BDNFP23560 247 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 MAGEA11P43364 429 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 ASIC1P78348 528 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 DUOXA2Q1HG44 320 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 DPH6Q7L8W6 267 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 TRAPPC11Q7Z392 1133 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.83■□□□□ 0.77
PRKCB-209ENST00000498058 SCFD1Q8WVM8 642 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 ZNF516Q92618 1163 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 ZNF396Q96N95 335 aaPredicted RBP19.83■□□□□ 0.77
PRKCB-209ENST00000498058 LINC00597Q9H2U6 94 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 ECT2Q9H8V3 914 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 AGPAT3Q9NRZ7 376 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 TMEM30AQ9NV96 361 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 CDH9Q9ULB4 789 aa19.83■□□□□ 0.77
PRKCB-209ENST00000498058 EIF3DO15371 548 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRKCB-209ENST00000498058 TNNC2P02585 160 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 GRSF1Q12849 480 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRKCB-209ENST00000498058 MYO1EQ12965 1108 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 PDGFRLQ15198 375 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 CSRP2Q16527 193 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 EML3Q32P44 896 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 ATL3Q6DD88 541 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 CC2D1AQ6P1N0 951 aaPredicted RBP19.82■□□□□ 0.76
PRKCB-209ENST00000498058 CNNM4Q6P4Q7 775 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 PRR23CQ6ZRP0 262 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 WDR49Q8IV35 697 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 NELFCDQ8IXH7 590 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 TTC16Q8NEE8 873 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 OSCP1Q8WVF1 389 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 C7orf25Q9BPX7 421 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 RTKNQ9BST9 563 aa19.82■□□□□ 0.76
PRKCB-209ENST00000498058 DUS2Q9NX74 493 aaKnown RBP19.82■□□□□ 0.76
PRKCB-209ENST00000498058 MAGEC2Q9UBF1 373 aaPredicted RBP19.82■□□□□ 0.76
PRKCB-209ENST00000498058 TRAV19A0A0A6YYK7 116 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.81■□□□□ 0.76
PRKCB-209ENST00000498058 LRP3O75074 770 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 CKMP06732 381 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 USP17L7P0C7H9 530 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 CACNA2D1P54289 1103 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 SURF1Q15526 300 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 CCDC6Q16204 474 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 SNRNP35Q16560 246 aaKnown RBP19.81■□□□□ 0.76
PRKCB-209ENST00000498058 FAM26FQ5R3K3 315 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 CEP68Q76N32 757 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 KBTBD6Q86V97 674 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 PLEKHO2Q8TD55 490 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 SH3RF2Q8TEC5 729 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 PCED1BQ96HM7 432 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 SPATA17Q96L03 361 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 P2RY13Q9BPV8 354 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 BLZF1Q9H2G9 400 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 CUEDC2Q9H467 287 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 DPEP3Q9H4B8 488 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
PRKCB-209ENST00000498058 AXIN1O15169 862 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 CUTAO60888 179 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 YEATS4O95619 227 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 DLATP10515 647 aaKnown RBP19.8■□□□□ 0.76
PRKCB-209ENST00000498058 SDHBP21912 280 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 CYP2J2P51589 502 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 CYP24A1Q07973 514 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 PSMD6Q15008 389 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 GAB4Q2WGN9 574 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 FOXD4L6Q3SYB3 417 aaPredicted RBP19.8■□□□□ 0.76
PRKCB-209ENST00000498058 MDH1BQ5I0G3 518 aa19.8■□□□□ 0.76
PRKCB-209ENST00000498058 FOXD4L3Q6VB84 417 aaPredicted RBP19.8■□□□□ 0.76
PRKCB-209ENST00000498058 C4orf50Q6ZRC1 276 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms