RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 CELF4Q9BZC1 486 aaKnown RBP21■□□□□ 0.95
ACTN4-208ENST00000497637 VRTNQ9H8Y1 702 aa21■□□□□ 0.95
ACTN4-208ENST00000497637 TRPV2Q9Y5S1 764 aa21■□□□□ 0.95
ACTN4-208ENST00000497637 CTAGE15A4D2H0 777 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 HIDE1A8MVS5 230 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 CTAGE8P0CG41 777 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 PPM1AP35813 382 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 KIAA0319Q5VV43 1072 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 TMEM270Q6UE05 265 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 TMC7Q7Z402 723 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 CTAGE6Q86UF2 777 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 CTAGE4Q8IX94 777 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 RHOT2Q8IXI1 618 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 SYCE1Q8N0S2 351 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 SLC35G2Q8TBE7 412 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 TMEM40Q8WWA1 233 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 GOLGA1Q92805 767 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 ACSF2Q96CM8 615 aaPredicted RBP20.99■□□□□ 0.95
ACTN4-208ENST00000497637 ARHGEF26Q96DR7 871 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 TSPAN18Q96SJ8 248 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 OSBPL9Q96SU4 736 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 THAP2Q9H0W7 228 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 HCFC2Q9Y5Z7 792 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 R4GN57 208 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 KIAA1671Q9BY89 1806 aa20.99■□□□□ 0.95
ACTN4-208ENST00000497637 PLXNA4Q9HCM2 1894 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 MAP1BP46821 2468 aaKnown RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 SRGAP2O75044 1071 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 MTA2O94776 668 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 STAU1O95793 577 aaKnown RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 EOMESO95936 686 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 RBP5P82980 135 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 ERCC6LQ2NKX8 1250 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 ZNF667Q5HYK9 610 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 KIAA1841Q6NSI8 718 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 SIX5Q8N196 739 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 GPR161Q8N6U8 529 aaKnown RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 MRPL43Q8N983 215 aaKnown RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 UBE2Q2Q8WVN8 375 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 RABGGTAQ92696 567 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 EIF2AQ9BY44 585 aaKnown RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 ERVK-5Q9HDB9 667 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 DZANK1Q9NVP4 752 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 SNTG2Q9NY99 539 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 CDH22Q9UJ99 828 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 ITGA11Q9UKX5 1188 aa20.98■□□□□ 0.95
ACTN4-208ENST00000497637 V9GYY5 206 aaPredicted RBP20.98■□□□□ 0.95
ACTN4-208ENST00000497637 FTCDO95954 541 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 CYP1A1P04798 512 aaPredicted RBP20.97■□□□□ 0.95
ACTN4-208ENST00000497637 CYP1A2P05177 515 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 UNGP13051 313 aaPredicted RBP20.97■□□□□ 0.95
ACTN4-208ENST00000497637 ABCB4P21439 1286 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 ASPAP45381 313 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 YARSP54577 528 aaKnown RBP20.97■□□□□ 0.95
ACTN4-208ENST00000497637 SMC1AQ14683 1233 aaKnown RBP20.97■□□□□ 0.95
ACTN4-208ENST00000497637 ELF2Q15723 593 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 UBXN11Q5T124 520 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 PPP1R2P3Q6NXS1 205 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 SLC24A5Q71RS6 500 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 OTOP3Q7RTS5 596 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 BCO2Q9BYV7 579 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 CYP3A43Q9HB55 503 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 ABCB6Q9NP58 842 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 DPP3Q9NY33 737 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 DUSP12Q9UNI6 340 aa20.97■□□□□ 0.95
ACTN4-208ENST00000497637 STK25O00506 426 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 CALCAP01258 141 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 KRT19P08727 400 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 GNA15P30679 374 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 RPS6KA1Q15418 735 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 ZBTB6Q15916 424 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 ALKAL1Q6UXT8 129 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 ZNF572Q7Z3I7 529 aaPredicted RBP20.96■□□□□ 0.95
ACTN4-208ENST00000497637 CREG2Q8IUH2 290 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 KIF12Q96FN5 646 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 CISHQ9NSE2 258 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 RNF14Q9UBS8 474 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 GTF3C4Q9UKN8 822 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 PIN4Q9Y237 131 aaKnown RBP20.96■□□□□ 0.95
ACTN4-208ENST00000497637 GPR179Q6PRD1 2367 aa20.96■□□□□ 0.95
ACTN4-208ENST00000497637 CES2O00748 559 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 CLSTN1O94985 981 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 ITGB3P05106 788 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 NFX1Q12986 1120 aaKnown RBP20.95■□□□□ 0.94
ACTN4-208ENST00000497637 XKR4Q5GH76 650 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 FAM228AQ86W67 206 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 COG1Q8WTW3 980 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 TRIM11Q96F44 468 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 FAM124BQ9H5Z6 455 aaPredicted RBP20.95■□□□□ 0.94
ACTN4-208ENST00000497637 CWH43Q9H720 699 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 OSGEPQ9NPF4 335 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 RGS18Q9NS28 235 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 WNT16Q9UBV4 365 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 POLIQ9UNA4 740 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 AGAP1Q9UPQ3 857 aa20.95■□□□□ 0.94
ACTN4-208ENST00000497637 NOC2LQ9Y3T9 749 aaKnown RBP20.95■□□□□ 0.94
ACTN4-208ENST00000497637 ANK1P16157 1881 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 ZNF185O15231 689 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 BUB1BO60566 1050 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms