RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RPL10AP62906 217 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 OTUD4Q01804 1114 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 C6orf183Q5T699 404 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 NDUFAF2Q8N183 169 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 ATXN7L3BQ96GX2 97 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 SERAC1Q96JX3 654 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 SRPK1Q96SB4 655 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 TCHPQ9BT92 498 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 SEMA6AQ9H2E6 1030 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 XPNPEP1Q9NQW7 623 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 DNAJC16Q9Y2G8 782 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 FKBP6O75344 327 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 AVILO75366 819 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 ENO3P13929 434 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 GCAP28676 217 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 COPAP53621 1224 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 TSPY1Q01534 308 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 LPIN1Q14693 890 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 PPP2R5DQ14738 602 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 CCNG2Q16589 344 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 MYLK3Q32MK0 819 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 CMPK2Q5EBM0 449 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 VWA5B1Q5TIE3 1220 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 ATG16L1Q676U5 607 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 NLRX1Q86UT6 975 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 RAVER1Q8IY67 606 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 FAM71DQ8N9W8 422 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZBTB8BQ8NAP8 495 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 XXYLT1Q8NBI6 393 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZSCAN18Q8TBC5 510 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 GPRC5CQ9NQ84 441 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 MTMR4Q9NYA4 1195 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 PTTG2Q9NZH5 202 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 PLA2G4CQ9UP65 541 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 AP4B1Q9Y6B7 739 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 LRP6O75581 1613 aa11.08□□□□□ -0.64
TRAPPC12-223ENST00000497597 GOLGA8QA0A0J9YX86 632 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 A0A1B0GTW7 788 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ESYT2A0FGR8 921 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 GOLGA8OA6NCC3 632 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 E9PBE3 544 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 GOLGA8NF8WBI6 632 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 MSH4O15457 936 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 TYROBPO43914 113 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 KLHL41O60662 606 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 PENKP01210 267 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ALDH1A3P47895 512 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ENTPD1P49961 510 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 STX3Q13277 289 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 KLHL38Q2WGJ6 581 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 FAM102BQ5T8I3 360 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 SPOPLQ6IQ16 392 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ACAD10Q6JQN1 1059 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 TMEM270Q6UE05 265 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 FBXO33Q7Z6M2 555 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 RIOX1Q9H6W3 641 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 USP29Q9HBJ7 922 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 CYLDQ9NQC7 956 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 OLFML3Q9NRN5 406 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 PCDHB4Q9Y5E5 795 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 HEY1Q9Y5J3 304 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 MAGEB2O15479 319 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 CSPG5O95196 566 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 KCNA4P22459 653 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ELK3P41970 407 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 EIF2B2P49770 351 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 LMNB2Q03252 620 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF543Q08ER8 600 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 TBL3Q12788 808 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 MSS51Q4VC12 460 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 TMEM110Q86TL2 294 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 PDSS2Q86YH6 399 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 CLVS1Q8IUQ0 354 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 AZIN2Q96A70 460 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 HAPLN3Q96S86 360 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 HSPBP1Q9NZL4 362 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 FIS1Q9Y3D6 152 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 COL1A1P02452 1464 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 DDX60Q8IY21 1712 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 GIPC1O14908 333 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 DCXO43602 365 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 FDX1P10109 184 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 SOX11P35716 441 aa11.07□□□□□ -0.64
TRAPPC12-223ENST00000497597 FDFT1P37268 417 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms