RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 BDNFP23560 247 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 CMA1P23946 247 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 LMO2P25791 158 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 IFNAR2P48551 515 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 TNK2Q07912 1038 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 PKP1Q13835 747 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 DENND5BQ6ZUT9 1274 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 TMEM150AQ86TG1 271 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 STKLD1Q8NE28 680 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
PPM1F-209ENST00000497072 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 CCDC34Q96HJ3 373 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 EPC1Q9H2F5 836 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 TRPM5Q9NZQ8 1165 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
PPM1F-209ENST00000497072 SMG5Q9UPR3 1016 aaKnown RBP13.55□□□□□ -0.24
PPM1F-209ENST00000497072 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 COL4A2P08572 1712 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 A0A1B0GVL5 298 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 A8MXQ7 604 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 HCRTO43612 131 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 LILRB5O75023 590 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 ATG13O75143 517 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
PPM1F-209ENST00000497072 P4HA1P13674 534 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 PFKFB1P16118 471 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
PPM1F-209ENST00000497072 PPP3CCP48454 512 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 SATB1Q01826 763 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 NR1H3Q13133 447 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 SCARA3Q6AZY7 606 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 TXNDC11Q6PKC3 985 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 LIMS2Q7Z4I7 341 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 CPA6Q8N4T0 437 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 NELL1Q92832 810 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 ELOVL4Q9GZR5 314 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 EBF3Q9H4W6 596 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 CRTAC1Q9NQ79 661 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
PPM1F-209ENST00000497072 DUS2Q9NX74 493 aaKnown RBP13.54□□□□□ -0.24
PPM1F-209ENST00000497072 CCL26Q9Y258 94 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 FRMD4BQ9Y2L6 1034 aa13.54□□□□□ -0.24
PPM1F-209ENST00000497072 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 ACTN4O43707 911 aaKnown RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 STAU1O95793 577 aaKnown RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 PFKLP17858 780 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 HDCP19113 662 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 CNR2P34972 360 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 SYKP43405 635 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 MYL6P60660 151 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 MTF1Q14872 753 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 TRIM68Q6AZZ1 485 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 ATP2A3Q93084 1043 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 PCED1BQ96HM7 432 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 TNIP3Q96KP6 325 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 FAM83CQ9BQN1 747 aa13.53□□□□□ -0.24
PPM1F-209ENST00000497072 MRPL45Q9BRJ2 306 aaKnown RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
PPM1F-209ENST00000497072 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.24
PPM1F-209ENST00000497072 PDXKO00764 312 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 ABL1P00519 1130 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 SDHBP21912 280 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 STK4Q13043 487 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 NCOA4Q13772 614 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 CEP135Q66GS9 1140 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 LONP2Q86WA8 852 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 DCLK2Q8N568 766 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 ARL14EPQ8N8R7 260 aaPredicted RBP13.52□□□□□ -0.25
PPM1F-209ENST00000497072 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 CCDC26Q8TAB7 109 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 PARD3BQ8TEW8 1205 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 OSCP1Q8WVF1 389 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 C8orf48Q96LL4 319 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 CYP2S1Q96SQ9 504 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 SLC8A2Q9UPR5 921 aa13.52□□□□□ -0.25
PPM1F-209ENST00000497072 F8VP50 259 aa13.51□□□□□ -0.25
PPM1F-209ENST00000497072 KLRC4O43908 158 aa13.51□□□□□ -0.25
PPM1F-209ENST00000497072 TADA3O75528 432 aa13.51□□□□□ -0.25
PPM1F-209ENST00000497072 PAPSS2O95340 614 aaPredicted RBP13.51□□□□□ -0.25
PPM1F-209ENST00000497072 NR3C1P04150 777 aa13.51□□□□□ -0.25
PPM1F-209ENST00000497072 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms