RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 RFXAPO00287 272 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 STK25O00506 426 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ABLIM1O14639 778 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF18P17022 549 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ROR1Q01973 937 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 DUSP4Q13115 394 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 NR1I3Q14994 352 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 RASIP1Q5U651 963 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 C1orf228Q6PIY5 440 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 LRRC31Q6UY01 552 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 FAM35AQ86V20 835 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 C1orf131Q8NDD1 294 aaKnown RBP9.1□□□□□ -0.95
U2AF1-212ENST00000496462 MAFAQ8NHW3 353 aaPredicted RBP9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CAPN11Q9UMQ6 739 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 YBX2Q9Y2T7 364 aaKnown RBP9.1□□□□□ -0.95
U2AF1-212ENST00000496462 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 MYO1FO00160 1098 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 GRM6O15303 877 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CILPO75339 1184 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 F9P00740 461 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC175P0C221 793 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 SDC4P31431 198 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CASP14P31944 242 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 IFNAR2P48551 515 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CDH8P55286 799 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CLDN10P78369 228 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 COG7P83436 770 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 MAP7D3Q8IWC1 876 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 SYCE1Q8N0S2 351 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 CRYBG2Q8N1P7 616 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF653Q96CK0 615 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ZBP1Q9H171 429 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 IKZF4Q9H2S9 585 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 FAM204AQ9H8W3 233 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 GOLGA8SH3BPF8 625 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CST3P01034 146 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MBL2P11226 248 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 LCP1P13796 627 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 HARS2P49590 506 aaKnown RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MAP3K7CLP57077 242 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 RNASE9P60153 205 aaKnown RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 PTPN14Q15678 1187 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MEA1Q16626 185 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC70Q6NSX1 233 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MTSS1LQ765P7 747 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF354CQ86Y25 554 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 NSMCE1Q8WV22 266 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ASNSD1Q9NWL6 643 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 TSPAN16Q9UKR8 245 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 KIF5CO60282 957 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ATF2P15336 505 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CDR2Q01850 454 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 SOX4Q06945 474 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 C10orf120Q5SQS8 335 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ARHGAP17Q68EM7 881 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 GUCD1Q96NT3 240 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MRPL45Q9BRJ2 306 aaKnown RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MAK16Q9BXY0 300 aaKnown RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 DUSP16Q9BY84 665 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 YIPF1Q9Y548 306 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CLUHO75153 1309 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 LRRC53A6NM62 1247 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 TMCO5BA8MYB1 307 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 TEX28O15482 410 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ARHGAP6O43182 974 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ZMYND10O75800 440 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ABCB4P21439 1286 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 CTNNA2P26232 953 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 TWF1Q12792 350 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 SOWAHAQ2M3V2 549 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 HECTD3Q5T447 861 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ACBD5Q5T8D3 534 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF830Q96NB3 372 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-212ENST00000496462 RXFP1Q9HBX9 757 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
U2AF1-212ENST00000496462 SPOPO43791 374 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 TBC1D4O60343 1298 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 UNC45BQ8IWX7 931 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 TCEAL8Q8IYN2 117 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 EFHBQ8N7U6 833 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 TDRD5Q8NAT2 981 aaKnown RBP9.08□□□□□ -0.96
U2AF1-212ENST00000496462 CSGALNACT1Q8TDX6 532 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 SHC3Q92529 594 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 PPP1R13BQ96KQ4 1090 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 C8orf48Q96LL4 319 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 PANX2Q96RD6 677 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 FUCA2Q9BTY2 467 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ZCWPW1Q9H0M4 648 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF510Q9Y2H8 683 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
U2AF1-212ENST00000496462 EVPLQ92817 2033 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms