RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TDRD10Q5VZ19 366 aaKnown RBP15.26■□□□□ 0.03
VTI1A-209ENST00000496445 MON1AQ86VX9 555 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 SCN4BQ8IWT1 228 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 ZBTB44Q8NCP5 570 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 TMEM174Q8WUU8 243 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
VTI1A-209ENST00000496445 PCED1BQ96HM7 432 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 SLC22A12Q96S37 553 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 FAM83CQ9BQN1 747 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 DPEP3Q9H4B8 488 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 UXTQ9UBK9 157 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-209ENST00000496445 USP25Q9UHP3 1055 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 PCDHGA2Q9Y5H1 932 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 OTOL1A6NHN0 477 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 SOBPA7XYQ1 873 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 KINO60870 393 aaKnown RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 RPN1P04843 607 aaKnown RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 USP46P62068 366 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 TNNC1P63316 161 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 CLDN10P78369 228 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 CYP27A1Q02318 531 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 PSMD2Q13200 908 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 WDR72Q3MJ13 1102 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 C1orf228Q6PIY5 440 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 Q6ZS52 159 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 RALGPS2Q86X27 583 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 SLC9A9Q8IVB4 645 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 PARD3BQ8TEW8 1205 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 ELMO3Q96BJ8 720 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 KIF9Q9HAQ2 790 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 TRPC7Q9HCX4 862 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 TDP1Q9NUW8 608 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 TMEM30AQ9NV96 361 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 ZSCAN32Q9NX65 697 aa15.25■□□□□ 0.03
VTI1A-209ENST00000496445 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-209ENST00000496445 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 LILRB5O75023 590 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 VNN1O95497 513 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
VTI1A-209ENST00000496445 MYL1P05976 194 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 GNL1P36915 607 aaPredicted RBP15.24■□□□□ 0.03
VTI1A-209ENST00000496445 SYKP43405 635 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 DLG4P78352 724 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 SATB1Q01826 763 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 USP4Q13107 963 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 TRPC3Q13507 836 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 CCINQ13939 588 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 PON2Q15165 354 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
VTI1A-209ENST00000496445 ZNF77Q15935 545 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 OR6B3Q8NGW1 331 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 SNX25Q9H3E2 840 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 EBF3Q9H4W6 596 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 VRTNQ9H8Y1 702 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 C2orf42Q9NWW7 574 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 GCNT4Q9P109 453 aa15.24■□□□□ 0.03
VTI1A-209ENST00000496445 NXF1Q9UBU9 619 aaKnown RBP15.24■□□□□ 0.03
VTI1A-209ENST00000496445 CACNA1AO00555 2505 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 A0A1W2PQ27 194 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 A0A1W2PQ64 194 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 A0A1W2PQD8 194 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 PDXKO00764 312 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 NR3C1P04150 777 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 ARSAP15289 507 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 ATICP31939 592 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 GRIK1P39086 918 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 RAP1GAPP47736 663 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 CCR3P51677 355 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 DPYDQ12882 1025 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 BIRC3Q13489 604 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 LRRC32Q14392 662 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 DENND5BQ6ZUT9 1274 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 SYAP1Q96A49 352 aaPredicted RBP15.23■□□□□ 0.03
VTI1A-209ENST00000496445 CYP2S1Q96SQ9 504 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 TTLL2Q9BWV7 592 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 ZNF518BQ9C0D4 1074 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 EPC1Q9H2F5 836 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 THG1LQ9NWX6 298 aaKnown RBP15.23■□□□□ 0.03
VTI1A-209ENST00000496445 CEP250Q9BV73 2442 aa15.23■□□□□ 0.03
VTI1A-209ENST00000496445 TRAV19A0A0A6YYK7 116 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 F8VP50 259 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 TRIM66O15016 1216 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms