RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TBK1Q9UHD2 729 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 NAALADL1Q9UQQ1 740 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 CITO14578 2027 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ETS1P14921 441 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 IL1R2P27930 398 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PCK1P35558 622 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ADCYAP1R1P41586 468 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ACTN3Q08043 901 aaPredicted RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 STILQ15468 1287 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 FAM102AQ5T9C2 384 aaPredicted RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 RNASEH2BQ5TBB1 312 aaKnown RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 MAMDC4Q6UXC1 1216 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PIGWQ7Z7B1 504 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 CCDC13Q8IYE1 715 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 RSAD2Q8WXG1 361 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 NT5C1AQ9BXI3 368 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PHACTR1Q9C0D0 580 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 KDM4CQ9H3R0 1056 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 NKIRAS1Q9NYS0 192 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 USP18Q9UMW8 372 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 SLC45A1Q9Y2W3 748 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 UNCXA6NJT0 531 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 APOC4-APOC2K7ER74 178 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 SMAPO00193 183 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 PDHXO00330 501 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 TSPAN1O60635 241 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 APOC2P02655 101 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 CETPP11597 493 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 NDST1P52848 882 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 GRIK4Q16099 956 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 TAZQ16635 292 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 DCAF4L1Q3SXM0 396 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 DPH6Q7L8W6 267 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 SRRM1Q8IYB3 904 aaKnown RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 KIAA0319LQ8IZA0 1049 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 CMASQ8NFW8 434 aaPredicted RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 MGARPQ8TDB4 240 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 MAK16Q9BXY0 300 aaKnown RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 RSAD1Q9HA92 442 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 PCSK1NQ9UHG2 260 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 KAT6AQ92794 2004 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 RASA4BC9J798 803 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 ALOX15BO15296 676 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 RASA4O43374 803 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 TRUB2O95900 331 aaKnown RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 DESP17661 470 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 GPD1P21695 349 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 MIPP30301 263 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 STX2P32856 288 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 GRM5P41594 1212 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 ZNF143P52747 638 aaPredicted RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 LRRC14Q15048 493 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 LCLAT1Q6UWP7 414 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 DPP9Q86TI2 863 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 TDRPQ86YL5 185 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 RFX6Q8HWS3 928 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 PPIL6Q8IXY8 311 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 ZBED8Q8IZ13 594 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 ANKRD42Q8N9B4 389 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 HSPH1Q92598 858 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
CMSS1-208ENST00000496116 OSBPL7Q9BZF2 842 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 VPS37BQ9H9H4 285 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 UBN1Q9NPG3 1134 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 EURLQ9NYK6 297 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 TSPAN16Q9UKR8 245 aa11.62□□□□□ -0.55
CMSS1-208ENST00000496116 MCF2LO15068 1137 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 GHRP10912 638 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CREB1P16220 341 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 PHBP35232 272 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 GTF2A2P52657 109 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 ARL4CP56559 192 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CDC42EP1Q00587 391 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 PDE4CQ08493 712 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 PDIA2Q13087 525 aaKnown RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 TMED2Q15363 201 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 HIF1AQ16665 826 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 DGKDQ16760 1214 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 LACTB2Q53H82 288 aaPredicted RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CNPY4Q8N129 248 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 UBA3Q8TBC4 463 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CCT6BQ92526 530 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 ELAC2Q9BQ52 826 aaKnown RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CNPY3Q9BT09 278 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CALN1Q9BXU9 219 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 KATNBL1Q9H079 304 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 SENP1Q9P0U3 644 aa11.61□□□□□ -0.55
CMSS1-208ENST00000496116 DERAQ9Y315 318 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms