RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 RAP1GAPP47736 663 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 CACNA2D1P54289 1103 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 SNRPFP62306 86 aaKnown RBP21.33■■□□□ 1.01
HDGF-209ENST00000495212 NAIF1Q69YI7 327 aaPredicted RBP21.33■■□□□ 1.01
HDGF-209ENST00000495212 C4orf50Q6ZRC1 276 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 RALGPS2Q86X27 583 aaPredicted RBP21.33■■□□□ 1.01
HDGF-209ENST00000495212 ARL14EPQ8N8R7 260 aaPredicted RBP21.33■■□□□ 1.01
HDGF-209ENST00000495212 CHFRQ96EP1 664 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 PCED1BQ96HM7 432 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 FUBP3Q96I24 572 aaKnown RBP eCLIP21.33■■□□□ 1.01
HDGF-209ENST00000495212 XYLT2Q9H1B5 865 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 SNX25Q9H3E2 840 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 TMEM30AQ9NV96 361 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 THG1LQ9NWX6 298 aaKnown RBP21.33■■□□□ 1.01
HDGF-209ENST00000495212 PCDHGA2Q9Y5H1 932 aa21.33■■□□□ 1.01
HDGF-209ENST00000495212 GVINP1Q7Z2Y8 2422 aa21.33■■□□□ 1
HDGF-209ENST00000495212 GPR179Q6PRD1 2367 aa21.32■■□□□ 1
HDGF-209ENST00000495212 CLDN5O00501 218 aa21.32■■□□□ 1
HDGF-209ENST00000495212 LILRB5O75023 590 aa21.32■■□□□ 1
HDGF-209ENST00000495212 DDX6P26196 483 aaKnown RBP eCLIP21.32■■□□□ 13e-11■□□□□ 8.9
HDGF-209ENST00000495212 GRIK1P39086 918 aa21.32■■□□□ 1
HDGF-209ENST00000495212 NDUFA8P51970 172 aa21.32■■□□□ 1
HDGF-209ENST00000495212 MLLT6P55198 1093 aaPredicted RBP21.32■■□□□ 1
HDGF-209ENST00000495212 CDH8P55286 799 aa21.32■■□□□ 1
HDGF-209ENST00000495212 TNNC1P63316 161 aa21.32■■□□□ 1
HDGF-209ENST00000495212 DLG4P78352 724 aa21.32■■□□□ 1
HDGF-209ENST00000495212 TRPC3Q13507 836 aa21.32■■□□□ 1
HDGF-209ENST00000495212 ITPRIPL2Q3MIP1 535 aa21.32■■□□□ 1
HDGF-209ENST00000495212 TDRD10Q5VZ19 366 aaKnown RBP21.32■■□□□ 1
HDGF-209ENST00000495212 TRMT2BQ96GJ1 504 aaKnown RBP21.32■■□□□ 1
HDGF-209ENST00000495212 MYRFLQ96LU7 910 aa21.32■■□□□ 1
HDGF-209ENST00000495212 KCTD10Q9H3F6 313 aa21.32■■□□□ 1
HDGF-209ENST00000495212 SMYD3Q9H7B4 428 aa21.32■■□□□ 1
HDGF-209ENST00000495212 OTOGLQ3ZCN5 2332 aa21.32■■□□□ 1
HDGF-209ENST00000495212 PHACTR2O75167 634 aa21.31■■□□□ 1
HDGF-209ENST00000495212 MAGEA11P43364 429 aa21.31■■□□□ 1
HDGF-209ENST00000495212 KRT85P78386 507 aa21.31■■□□□ 1
HDGF-209ENST00000495212 PLCB2Q00722 1185 aa21.31■■□□□ 1
HDGF-209ENST00000495212 BIRC3Q13489 604 aa21.31■■□□□ 1
HDGF-209ENST00000495212 RUNX3Q13761 415 aa21.31■■□□□ 1
HDGF-209ENST00000495212 LPAL2Q16609 132 aa21.31■■□□□ 1
HDGF-209ENST00000495212 PKN3Q6P5Z2 889 aa21.31■■□□□ 1
HDGF-209ENST00000495212 SCARA5Q6ZMJ2 495 aa21.31■■□□□ 1
HDGF-209ENST00000495212 MYCBPAPQ8TBZ2 947 aa21.31■■□□□ 1
HDGF-209ENST00000495212 PARD3BQ8TEW8 1205 aa21.31■■□□□ 1
HDGF-209ENST00000495212 GOLPH3LQ9H4A5 285 aa21.31■■□□□ 1
HDGF-209ENST00000495212 GDPD2Q9HCC8 539 aa21.31■■□□□ 1
HDGF-209ENST00000495212 DMAC2Q9NW81 257 aa21.31■■□□□ 1
HDGF-209ENST00000495212 UXTQ9UBK9 157 aaPredicted RBP21.31■■□□□ 1
HDGF-209ENST00000495212 F8VP50 259 aa21.3■■□□□ 1
HDGF-209ENST00000495212 TACC1O75410 805 aa21.3■■□□□ 1
HDGF-209ENST00000495212 CLSTN1O94985 981 aa21.3■■□□□ 1
HDGF-209ENST00000495212 VNN1O95497 513 aa21.3■■□□□ 1
HDGF-209ENST00000495212 C4BPAP04003 597 aaKnown RBP21.3■■□□□ 1
HDGF-209ENST00000495212 RPN1P04843 607 aaKnown RBP21.3■■□□□ 1
HDGF-209ENST00000495212 PTPN1P18031 435 aaKnown RBP21.3■■□□□ 1
HDGF-209ENST00000495212 CXCL12P48061 93 aa21.3■■□□□ 1
HDGF-209ENST00000495212 CCR3P51677 355 aa21.3■■□□□ 1
HDGF-209ENST00000495212 LRRC32Q14392 662 aa21.3■■□□□ 1
HDGF-209ENST00000495212 RUBCNQ92622 972 aa21.3■■□□□ 1
HDGF-209ENST00000495212 MSANTD3Q96H12 275 aa21.3■■□□□ 1
HDGF-209ENST00000495212 B3GNT5Q9BYG0 378 aa21.3■■□□□ 1
HDGF-209ENST00000495212 ZNF518BQ9C0D4 1074 aa21.3■■□□□ 1
HDGF-209ENST00000495212 SDCBP2Q9H190 292 aa21.3■■□□□ 1
HDGF-209ENST00000495212 FBRSL1Q9HCM7 1045 aaKnown RBP21.3■■□□□ 1
HDGF-209ENST00000495212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.3■■□□□ 18e-8■■■■□ 25.6
HDGF-209ENST00000495212 POLR3BQ9NW08 1133 aaPredicted RBP21.3■■□□□ 1
HDGF-209ENST00000495212 GCNT4Q9P109 453 aa21.3■■□□□ 1
HDGF-209ENST00000495212 CGNQ9P2M7 1197 aaKnown RBP21.3■■□□□ 1
HDGF-209ENST00000495212 SPTBN4Q9H254 2564 aa21.29■■□□□ 1
HDGF-209ENST00000495212 A8MXQ7 604 aa21.29■■□□□ 1
HDGF-209ENST00000495212 CHURC1-FNTBB4DL54 471 aa21.29■■□□□ 1
HDGF-209ENST00000495212 CKMP06732 381 aa21.29■■□□□ 1
HDGF-209ENST00000495212 SYKP43405 635 aa21.29■■□□□ 1
HDGF-209ENST00000495212 FNTBP49356 437 aa21.29■■□□□ 1
HDGF-209ENST00000495212 IFRD2Q12894 506 aaPredicted RBP21.29■■□□□ 1
HDGF-209ENST00000495212 SRSF5Q13243 272 aaKnown RBP21.29■■□□□ 1
HDGF-209ENST00000495212 CCINQ13939 588 aa21.29■■□□□ 1
HDGF-209ENST00000495212 ZNF77Q15935 545 aa21.29■■□□□ 1
HDGF-209ENST00000495212 HEATR6Q6AI08 1181 aaKnown RBP21.29■■□□□ 1
HDGF-209ENST00000495212 FSTL4Q6MZW2 842 aa21.29■■□□□ 1
HDGF-209ENST00000495212 VSTM1Q6UX27 236 aa21.29■■□□□ 1
HDGF-209ENST00000495212 SPEM1Q8N4L4 309 aa21.29■■□□□ 1
HDGF-209ENST00000495212 SPATA17Q96L03 361 aa21.29■■□□□ 1
HDGF-209ENST00000495212 ZMYM5Q9UJ78 669 aa21.29■■□□□ 1
HDGF-209ENST00000495212 SMG5Q9UPR3 1016 aaKnown RBP21.29■■□□□ 1
HDGF-209ENST00000495212 MAPK8IP1Q9UQF2 711 aa21.29■■□□□ 1
HDGF-209ENST00000495212 WNT6Q9Y6F9 365 aa21.29■■□□□ 1
HDGF-209ENST00000495212 HELZP42694 1942 aaKnown RBP21.29■■□□□ 1
HDGF-209ENST00000495212 TRAV19A0A0A6YYK7 116 aa21.28■■□□□ 1
HDGF-209ENST00000495212 NR3C1P04150 777 aa21.28■■□□□ 1
HDGF-209ENST00000495212 ID4P47928 161 aa21.28■■□□□ 1
HDGF-209ENST00000495212 ZXDBP98169 803 aa21.28■■□□□ 1
HDGF-209ENST00000495212 FAM160A1Q05DH4 1040 aa21.28■■□□□ 1
HDGF-209ENST00000495212 PSMD2Q13200 908 aa21.28■■□□□ 1
HDGF-209ENST00000495212 ORC1Q13415 861 aa21.28■■□□□ 1
HDGF-209ENST00000495212 NCOA4Q13772 614 aa21.28■■□□□ 1
HDGF-209ENST00000495212 ZNF268Q14587 947 aaPredicted RBP21.28■■□□□ 1
HDGF-209ENST00000495212 MTF1Q14872 753 aa21.28■■□□□ 1
HDGF-209ENST00000495212 MAPRE1Q15691 268 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms