RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.64■■□□□ 1.37
HDDC3-203ENST00000494993 SLC30A4O14863 429 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 RNF40O75150 1001 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 ATP2C2O75185 946 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 CKMP06732 381 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 DRD1P21728 446 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 GJA4P35212 333 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 HOXD13P35453 343 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 CPA6Q8N4T0 437 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 OSCP1Q8WVF1 389 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 GAB3Q8WWW8 586 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 TRIM9Q9C026 710 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 CUEDC2Q9H467 287 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 ECT2Q9H8V3 914 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 KIAA1586Q9HCI6 787 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 DUS2Q9NX74 493 aaKnown RBP23.64■■□□□ 1.37
HDDC3-203ENST00000494993 MAGEC2Q9UBF1 373 aaPredicted RBP23.64■■□□□ 1.37
HDDC3-203ENST00000494993 SLC8A2Q9UPR5 921 aa23.64■■□□□ 1.37
HDDC3-203ENST00000494993 SPTLC2O15270 562 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 EIF3DO15371 548 aaKnown RBP eCLIP23.63■■□□□ 1.37
HDDC3-203ENST00000494993 LMO2P25791 158 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 PXNP49023 591 aaPredicted RBP23.63■■□□□ 1.37
HDDC3-203ENST00000494993 GALK1P51570 392 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 PSMC1P62191 440 aaKnown RBP23.63■■□□□ 1.37
HDDC3-203ENST00000494993 WDR49Q8IV35 697 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 ARL14EPQ8N8R7 260 aaPredicted RBP23.63■■□□□ 1.37
HDDC3-203ENST00000494993 FSIP1Q8NA03 581 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 MYLPFQ96A32 169 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 EXOC4Q96A65 974 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 P2RY13Q9BPV8 354 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 CRTAC1Q9NQ79 661 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 GCNT4Q9P109 453 aa23.63■■□□□ 1.37
HDDC3-203ENST00000494993 C2orf78A6NCI8 922 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 FOXD2O60548 495 aaPredicted RBP23.62■■□□□ 1.37
HDDC3-203ENST00000494993 PPP6R2O75170 966 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 WARSP23381 471 aaKnown RBP23.62■■□□□ 1.37
HDDC3-203ENST00000494993 IFNAR2P48551 515 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 MAPRE1Q15691 268 aaKnown RBP23.62■■□□□ 1.37
HDDC3-203ENST00000494993 FBXO43Q4G163 708 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 NAIF1Q69YI7 327 aaPredicted RBP23.62■■□□□ 1.37
HDDC3-203ENST00000494993 VSTM1Q6UX27 236 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 EPM2AIP1Q7L775 607 aaPredicted RBP23.62■■□□□ 1.37
HDDC3-203ENST00000494993 TTC16Q8NEE8 873 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 ZNF507Q8TCN5 953 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 ATP2A3Q93084 1043 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 SPATA17Q96L03 361 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 WNT6Q9Y6F9 365 aa23.62■■□□□ 1.37
HDDC3-203ENST00000494993 MYOFQ9NZM1 2061 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 CNOT1A5YKK6 2376 aaKnown RBP23.61■■□□□ 1.37
HDDC3-203ENST00000494993 K7ELQ4 463 aaPredicted RBP23.61■■□□□ 1.37
HDDC3-203ENST00000494993 RPP40O75818 363 aaKnown RBP23.61■■□□□ 1.37
HDDC3-203ENST00000494993 TCF3P15923 654 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 ASIC1P78348 528 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 AMPD3Q01432 767 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 KCNB1Q14721 858 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 EML3Q32P44 896 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 TRAPPC11Q7Z392 1133 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 CACNA2D4Q7Z3S7 1137 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 DHX58Q96C10 678 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 CEP295NLQ96MC4 621 aa23.61■■□□□ 1.37
HDDC3-203ENST00000494993 AXIN1O15169 862 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 GDF9O60383 454 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 PDGFRBP09619 1106 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 BDNFP23560 247 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 CYP27A1Q02318 531 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 FAM26FQ5R3K3 315 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 CNNM4Q6P4Q7 775 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 CAMKK1Q8N5S9 505 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 SH3RF2Q8TEC5 729 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 CD101Q93033 1021 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 LOXL4Q96JB6 756 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 ZNF396Q96N95 335 aaPredicted RBP23.6■■□□□ 1.37
HDDC3-203ENST00000494993 MMS19Q96T76 1030 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 AGPAT3Q9NRZ7 376 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 POLR3BQ9NW08 1133 aaPredicted RBP23.6■■□□□ 1.37
HDDC3-203ENST00000494993 TFIP11Q9UBB9 837 aaKnown RBP23.6■■□□□ 1.37
HDDC3-203ENST00000494993 ARHGAP26Q9UNA1 814 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 NUP205Q92621 2012 aa23.6■■□□□ 1.37
HDDC3-203ENST00000494993 TGFB1I1O43294 461 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 EPN2O95208 641 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 CCDC192P0DO97 292 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 HDCP19113 662 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 GRIK1P39086 918 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 SNRNP35Q16560 246 aaKnown RBP23.59■■□□□ 1.37
HDDC3-203ENST00000494993 DENND5BQ6ZUT9 1274 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 KBTBD6Q86V97 674 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 IQUBQ8NA54 791 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 RDH13Q8NBN7 331 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 RPLP0P6Q8NHW5 317 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 EZH1Q92800 747 aaPredicted RBP23.59■■□□□ 1.37
HDDC3-203ENST00000494993 PCED1BQ96HM7 432 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 CGRRF1Q99675 332 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 MYH10P35580 1976 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 UBE4BO95155 1302 aa23.59■■□□□ 1.37
HDDC3-203ENST00000494993 ACACBO00763 2458 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 CACNA1BQ00975 2339 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 CUTAO60888 179 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 AKAP3O75969 853 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 YEATS4O95619 227 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 CST3P01034 146 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms