RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 MCCD1P59942 119 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-211ENST00000494800 MORC3Q14149 939 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 WDR44Q5JSH3 913 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 KLHL10Q6JEL2 608 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 DENND5BQ6ZUT9 1274 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
HDAC4-211ENST00000494800 CMTM8Q8IZV2 173 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 TMEM105Q8N8V8 129 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 TRIML1Q8N9V2 468 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 C8orf48Q96LL4 319 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 CEP63Q96MT8 703 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 NIF3L1Q9GZT8 377 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 CYP3A43Q9HB55 503 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 THG1LQ9NWX6 298 aaKnown RBP18.78■□□□□ 0.6
HDAC4-211ENST00000494800 MRPS17Q9Y2R5 130 aaKnown RBP18.78■□□□□ 0.6
HDAC4-211ENST00000494800 SIT1Q9Y3P8 196 aa18.78■□□□□ 0.6
HDAC4-211ENST00000494800 TRIM49BA6NDI0 452 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 BIN1O00499 593 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 F11P03951 625 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 PLA2G5P39877 138 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 ASPAP45381 313 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 PDE6CP51160 858 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 PMS1P54277 932 aaKnown RBP18.77■□□□□ 0.6
HDAC4-211ENST00000494800 IER5LQ5T953 404 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 FOXR2Q6PJQ5 311 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 TTC39CQ8N584 583 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 CELF5Q8N6W0 485 aaKnown RBP18.77■□□□□ 0.6
HDAC4-211ENST00000494800 MAB21L3Q8N8X9 362 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 CSGALNACT1Q8TDX6 532 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 TRPV5Q9NQA5 729 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 RAB20Q9NX57 234 aa18.77■□□□□ 0.6
HDAC4-211ENST00000494800 KANSL1LA0AUZ9 987 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 F8VP50 259 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 CHADO15335 359 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 GALR2O43603 387 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-211ENST00000494800 PPP3CCP48454 512 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 NDST1P52848 882 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 CCDC40Q4G0X9 1142 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 ARHGAP29Q52LW3 1261 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 ZNF852Q6ZMS4 543 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 ACOT1Q86TX2 421 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 MON1AQ86VX9 555 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 STKLD1Q8NE28 680 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 NELFBQ8WX92 580 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 ELMO3Q96BJ8 720 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 SMARCD1Q96GM5 515 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 NELL2Q99435 816 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 SLC46A2Q9BY10 475 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 B3GNT5Q9BYG0 378 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 BCO2Q9BYV7 579 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 ZNF518BQ9C0D4 1074 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 SDCBP2Q9H190 292 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 KIF9Q9HAQ2 790 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 TRPC7Q9HCX4 862 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.76■□□□□ 0.59
HDAC4-211ENST00000494800 NME7Q9Y5B8 376 aa18.76■□□□□ 0.59
HDAC4-211ENST00000494800 TRAV19A0A0A6YYK7 116 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 MAN2B1O00754 1011 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 NCAM2O15394 837 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 FGFR1OPO95684 399 aaKnown RBP18.75■□□□□ 0.59
HDAC4-211ENST00000494800 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 FCHO2Q0JRZ9 810 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 INCA1Q0VD86 236 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 CETN1Q12798 172 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 PAK1Q13153 545 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 CAMK4Q16566 473 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 TXNDC8Q6A555 127 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 C1orf228Q6PIY5 440 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 TPRG1Q6ZUI0 275 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 FRMD5Q7Z6J6 570 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 FILIP1Q7Z7B0 1213 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 TMEM150AQ86TG1 271 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 CRYBG2Q8N1P7 616 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 SLITRK1Q96PX8 696 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 NT5C1AQ9BXI3 368 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 DMAP1Q9NPF5 467 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-211ENST00000494800 HEBP1Q9NRV9 189 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 TRPM5Q9NZQ8 1165 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 CTNND2Q9UQB3 1225 aa18.75■□□□□ 0.59
HDAC4-211ENST00000494800 PPP1R3GB7ZBB8 358 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 CLDN5O00501 218 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 PI15O43692 258 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 RTN3O95197 1032 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-211ENST00000494800 GNA14O95837 355 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 CKMP06732 381 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 USP17L7P0C7H9 530 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 GLULP15104 373 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
HDAC4-211ENST00000494800 UBXN2BQ14CS0 331 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 FAM35AQ86V20 835 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 GPIHBP1Q8IV16 184 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 CCDC105Q8IYK2 499 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 PRSS33Q8NF86 280 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 PJA1Q8NG27 643 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 MSANTD3Q96H12 275 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms