RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MYL6P60660 151 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 ZXDBP98169 803 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 AMPD3Q01432 767 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 STK4Q13043 487 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 USP4Q13107 963 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 ZNF77Q15935 545 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 LPAL2Q16609 132 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 FSTL4Q6MZW2 842 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 MON1AQ86VX9 555 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 RALGPS2Q86X27 583 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-208ENST00000494728 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 XXYLT1Q8NBI6 393 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 EZH1Q92800 747 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-208ENST00000494728 PCED1BQ96HM7 432 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
VTI1A-208ENST00000494728 CYP2S1Q96SQ9 504 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 FBRSL1Q9HCM7 1045 aaKnown RBP12.46□□□□□ -0.41
VTI1A-208ENST00000494728 TRPC7Q9HCX4 862 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 GKN1Q9NS71 199 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-208ENST00000494728 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.41
VTI1A-208ENST00000494728 ACACBO00763 2458 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 A0A1B0GVL5 298 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 LRRIQ3A6PVS8 624 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 CHURC1-FNTBB4DL54 471 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 TNNI1P19237 187 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 TGM1P22735 817 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 DDX6P26196 483 aaKnown RBP eCLIP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PCSK1P29120 753 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MAGEA11P43364 429 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 RAP1GAPP47736 663 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 ID4P47928 161 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 FNTBP49356 437 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 CCR3P51677 355 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 RPL10AP62906 217 aaKnown RBP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 SURF1Q15526 300 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 ITPRIPL2Q3MIP1 535 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MDH1BQ5I0G3 518 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 TDRD10Q5VZ19 366 aaKnown RBP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 DPH6Q7L8W6 267 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 SPEM1Q8N4L4 309 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MRPS31Q92665 395 aaKnown RBP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MSANTD3Q96H12 275 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MMS19Q96T76 1030 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 SDCBP2Q9H190 292 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 TDP1Q9NUW8 608 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 CDH9Q9ULB4 789 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 WNT6Q9Y6F9 365 aa12.45□□□□□ -0.42
VTI1A-208ENST00000494728 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
VTI1A-208ENST00000494728 PVALEFA0A1B0GWK0 134 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 ANTXRLA6NF34 631 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 VNN1O95497 513 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 DLG4P78352 724 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 LRRC32Q14392 662 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 ZNF268Q14587 947 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-208ENST00000494728 MTF1Q14872 753 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
VTI1A-208ENST00000494728 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 HEATR6Q6AI08 1181 aaKnown RBP12.44□□□□□ -0.42
VTI1A-208ENST00000494728 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 HS2ST1Q7LGA3 356 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 ARL14EPQ8N8R7 260 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-208ENST00000494728 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 KIF9Q9HAQ2 790 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 NCDNQ9UBB6 729 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 HPSEQ9Y251 543 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 FRYQ5TBA9 3013 aa12.44□□□□□ -0.42
VTI1A-208ENST00000494728 F8VP50 259 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 CLDN5O00501 218 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 SCAMP3O14828 347 aaKnown RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 HRO43593 1189 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 EXOC3O60645 756 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 TACC1O75410 805 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 EGFP01133 1207 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 CKMP06732 381 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 CXCL12P48061 93 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 CDH8P55286 799 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 RUNX3Q13761 415 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 TMEM196Q5HYL7 178 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms