RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 USP13Q92995 863 aaPredicted RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 SLC22A12Q96S37 553 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 HINFPQ9BQA5 517 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 SEMA4AQ9H3S1 761 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 DPEP3Q9H4B8 488 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 EBF3Q9H4W6 596 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 C8orf33Q9H7E9 229 aaPredicted RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 GDPD2Q9HCC8 539 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 THG1LQ9NWX6 298 aaKnown RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 OBP2AQ9NY56 170 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 CGNQ9P2M7 1197 aaKnown RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 MAPK8IP1Q9UQF2 711 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 HPSEQ9Y251 543 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 DMXL1Q9Y485 3027 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 RALGAPA1Q6GYQ0 2036 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 LRRIQ3A6PVS8 624 aaPredicted RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 A8MXQ7 604 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 KINO60870 393 aaKnown RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 TADA3O75528 432 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 C4BPAP04003 597 aaKnown RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 RPN1P04843 607 aaKnown RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 WEE1P30291 646 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 HOXC13P31276 330 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 USP46P62068 366 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 DLG4P78352 724 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 BIRC3Q13489 604 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 ZNF528Q3MIS6 628 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 CFAP221Q4G0U5 840 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 WDR44Q5JSH3 913 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 C12orf56Q8IXR9 622 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 ARL14EPQ8N8R7 260 aaPredicted RBP10.25□□□□□ -0.77
MSH5-218ENST00000494646 RIN3Q8TB24 985 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 SPATA18Q8TC71 538 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 PARD3BQ8TEW8 1205 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 PCED1BQ96HM7 432 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 FUBP3Q96I24 572 aaKnown RBP eCLIP10.25□□□□□ -0.77
MSH5-218ENST00000494646 FAM83CQ9BQN1 747 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 KCTD10Q9H3F6 313 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.25□□□□□ -0.77
MSH5-218ENST00000494646 DMAC2Q9NW81 257 aa10.25□□□□□ -0.77
MSH5-218ENST00000494646 SDK1Q7Z5N4 2213 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 C2orf78A6NCI8 922 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 CLDN5O00501 218 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 PDXKO00764 312 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 TACC1O75410 805 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 ABL1P00519 1130 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 ARSAP15289 507 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 DDX6P26196 483 aaKnown RBP eCLIP10.24□□□□□ -0.77
MSH5-218ENST00000494646 CTHP32929 405 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 MAGEA11P43364 429 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 CXCL12P48061 93 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 MLLT6P55198 1093 aaPredicted RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 SATB1Q01826 763 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 IFRD2Q12894 506 aaPredicted RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 RUNX3Q13761 415 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 MAPRE1Q15691 268 aaKnown RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 ITPRIPL2Q3MIP1 535 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 SCARA5Q6ZMJ2 495 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 RALGPS2Q86X27 583 aaPredicted RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 KIAA2013Q8IYS2 634 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 SUMF1Q8NBK3 374 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 GOLGA5Q8TBA6 731 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 TRMT2BQ96GJ1 504 aaKnown RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 MYRFLQ96LU7 910 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 B3GNT5Q9BYG0 378 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 HPS4Q9NQG7 708 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 C2orf42Q9NWW7 574 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 UXTQ9UBK9 157 aaPredicted RBP10.24□□□□□ -0.77
MSH5-218ENST00000494646 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 ZMYM5Q9UJ78 669 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 DCHS1Q96JQ0 3298 aa10.24□□□□□ -0.77
MSH5-218ENST00000494646 HELZP42694 1942 aaKnown RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 F8VP50 259 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 CALUO43852 315 aaPredicted RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 ZNF202O95125 648 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 VNN1O95497 513 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 NR3C1P04150 777 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 CKMP06732 381 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 USP17L7P0C7H9 530 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 HDCP19113 662 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 ANXA13P27216 316 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 ATICP31939 592 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 GALK1P51570 392 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 DMWDQ09019 674 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 DPYDQ12882 1025 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 NCOA4Q13772 614 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 LRRC32Q14392 662 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 LPAL2Q16609 132 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms