RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 MRPL45Q9BRJ2 306 aaKnown RBP11.6□□□□□ -0.55
ZIC4-216ENST00000494569 TMEM109Q9BVC6 243 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 WDR35Q9P2L0 1181 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 SLC12A6Q9UHW9 1150 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 RECQL4O94761 1208 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 KRT14P02533 472 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 BMP8BP34820 402 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 IRAK1P51617 712 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 COPS2P61201 443 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 PDCLQ13371 301 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 PTK6Q13882 451 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 ARHGAP17Q68EM7 881 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 TRNP1Q6NT89 227 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 KDM7AQ6ZMT4 941 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
ZIC4-216ENST00000494569 RELL1Q8IUW5 271 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 JOSD2Q8TAC2 188 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 FAM76AQ8TAV0 307 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 CHST7Q9NS84 486 aa11.6□□□□□ -0.55
ZIC4-216ENST00000494569 R3HDM2Q9Y2K5 976 aaKnown RBP11.6□□□□□ -0.55
ZIC4-216ENST00000494569 SRRM3A6NNA2 597 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 GOLGA8KD6RF30 607 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 F8VP50 259 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 CST5P28325 142 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 DNAJC21Q5F1R6 531 aaKnown RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 CYP4A22Q5TCH4 519 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 DNAJC24Q6P3W2 148 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SYDE1Q6ZW31 735 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 MAGOHBQ96A72 148 aaKnown RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 HES2Q9Y543 173 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SPTLC1O15269 473 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 KLRC2P26717 231 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 LRPAP1P30533 357 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 RFC1P35251 1148 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 ARSEP51690 589 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 ADCY2Q08462 1091 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 ORC1Q13415 861 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 CCNG2Q16589 344 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SOWAHAQ2M3V2 549 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 TAF2Q6P1X5 1199 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 RCOR2Q8IZ40 523 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 PPP1R10Q96QC0 940 aaKnown RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 ADAM7Q9H2U9 754 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 MTUS1Q9ULD2 1270 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZIC4-216ENST00000494569 PLXNA3P51805 1871 aa11.59□□□□□ -0.55
ZIC4-216ENST00000494569 ENDOD1O94919 500 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 FAM163BP0C2L3 166 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 GBP1P32455 592 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 FCGRTP55899 365 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.55
ZIC4-216ENST00000494569 ACAP1Q15027 740 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 STILQ15468 1287 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 SERINC5Q86VE9 423 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 CRYBG2Q8N1P7 616 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 PXYLP1Q8TE99 480 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 UBQLN1Q9UMX0 589 aaKnown RBP11.58□□□□□ -0.55
ZIC4-216ENST00000494569 EFR3BQ9Y2G0 817 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 IPPQ9Y573 584 aa11.58□□□□□ -0.55
ZIC4-216ENST00000494569 PTGESO14684 152 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 LRCH4O75427 683 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 RALAP11233 206 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 GNAT1P11488 350 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 CDKN2BP42772 138 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 MRPS6P82932 125 aaKnown RBP11.58□□□□□ -0.56
ZIC4-216ENST00000494569 MTA1Q13330 715 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 ATP13A4Q4VNC1 1196 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 SGO2Q562F6 1265 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
ZIC4-216ENST00000494569 TTC30AQ86WT1 665 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 GSTCDQ8NEC7 633 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 BEST2Q8NFU1 509 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 STK32AQ8WU08 396 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 SLC35F5Q8WV83 523 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
ZIC4-216ENST00000494569 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 NT5C1AQ9BXI3 368 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 ALPK3Q96L96 1907 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 hCG_1818297A0A087WSY0 165 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 DPYSL4O14531 572 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 SEPT4O43236 478 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
ZIC4-216ENST00000494569 FGFR1P11362 822 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 IL1R2P27930 398 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 MYO1EQ12965 1108 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 KCTD16Q68DU8 428 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 TMEM110Q86TL2 294 aa11.58□□□□□ -0.56
ZIC4-216ENST00000494569 GOLGA6L1Q8N7Z2 621 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms