RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 SSTR1P30872 391 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 SLC1A1P43005 524 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 SPOCD1Q6ZMY3 1216 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 DPP9Q86TI2 863 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 CCDC89Q8N998 374 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 NPLOC4Q8TAT6 608 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 GRK7Q8WTQ7 553 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 PEBP4Q96S96 227 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 OSMRQ99650 979 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 SNTG2Q9NY99 539 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 TUBGCP4Q9UGJ1 667 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 TRIP12Q14669 1992 aaPredicted RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 BPTFQ12830 3046 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 SNX3O60493 162 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 NDST1P52848 882 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 CCNG2Q16589 344 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 PIGWQ7Z7B1 504 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 CLEC4CQ8WTT0 213 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 NDRG1Q92597 394 aaKnown RBP13.04□□□□□ -0.32
PHF3-205ENST00000494284 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
PHF3-205ENST00000494284 LIASO43766 372 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 RPSAP08865 295 aaKnown RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 FOXN2P32314 431 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 ACOT1Q86TX2 421 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 ZC3H18Q86VM9 953 aaKnown RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 MRPL45Q9BRJ2 306 aaKnown RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 CALN1Q9BXU9 219 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 DPEP3Q9H4B8 488 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 IP6K2Q9UHH9 426 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 TSPAN1O60635 241 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 CST8O60676 142 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 NPTXRO95502 500 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 KLRC2P26717 231 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 GBP1P32455 592 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 CFAP57Q96MR6 1250 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 E5RJQ4 531 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 B4GALT4O60513 344 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 CDKN2BP42772 138 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 BEX3Q00994 111 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 CCL14Q16627 93 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 FASTKD5Q7L8L6 764 aaKnown RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 CCDC63Q8NA47 563 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 FAM81BQ96LP2 452 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 SERPINB12Q96P63 405 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 MIS12Q9H081 205 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
PHF3-205ENST00000494284 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
PHF3-205ENST00000494284 PLXNA1Q9UIW2 1896 aa13.02□□□□□ -0.32
PHF3-205ENST00000494284 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 C3orf70A6NLC5 250 aaPredicted RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 PDGFRBP09619 1106 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 WDR4P57081 412 aaKnown RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 OTUD4Q01804 1114 aaKnown RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 PTPN11Q06124 597 aaPredicted RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 TFDP1Q14186 410 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 GRIK4Q16099 956 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 CENPTQ96BT3 561 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 TRIM11Q96F44 468 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 MROH8Q9H579 483 aa13.02□□□□□ -0.33
PHF3-205ENST00000494284 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.33
PHF3-205ENST00000494284 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms