RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ZNF77Q15935 545 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 SNRNP35Q16560 246 aaKnown RBP25.56■■□□□ 1.68
TTC3-224ENST00000494243 NAIF1Q69YI7 327 aaPredicted RBP25.56■■□□□ 1.68
TTC3-224ENST00000494243 C4orf50Q6ZRC1 276 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 RDH13Q8NBN7 331 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 MYLPFQ96A32 169 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 MAGEC2Q9UBF1 373 aaPredicted RBP25.56■■□□□ 1.68
TTC3-224ENST00000494243 NME7Q9Y5B8 376 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 C2orf78A6NCI8 922 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 LRP3O75074 770 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 EGFP01133 1207 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 PDGFRBP09619 1106 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 CASP1P29466 404 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 GALK1P51570 392 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 MTF1Q14872 753 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 VSTM1Q6UX27 236 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 ARL14EPQ8N8R7 260 aaPredicted RBP25.55■■□□□ 1.68
TTC3-224ENST00000494243 SCFD1Q8WVM8 642 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 SPATA17Q96L03 361 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 GZF1Q9H116 711 aaPredicted RBP25.55■■□□□ 1.68
TTC3-224ENST00000494243 CDV3Q9UKY7 258 aaKnown RBP25.55■■□□□ 1.68
TTC3-224ENST00000494243 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.55■■□□□ 1.68
TTC3-224ENST00000494243 GREB1Q4ZG55 1949 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 ANAPC1Q9H1A4 1944 aa25.55■■□□□ 1.68
TTC3-224ENST00000494243 TRAV19A0A0A6YYK7 116 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 CLIC2O15247 247 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 BDNFP23560 247 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 GJA4P35212 333 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 USP4Q13107 963 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 PSMD6Q15008 389 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 FOXD4L5Q5VV16 416 aaPredicted RBP25.54■■□□□ 1.68
TTC3-224ENST00000494243 OSCP1Q8WVF1 389 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 FOXD4L4Q8WXT5 416 aaPredicted RBP25.54■■□□□ 1.68
TTC3-224ENST00000494243 MMS19Q96T76 1030 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 MRPL45Q9BRJ2 306 aaKnown RBP25.54■■□□□ 1.68
TTC3-224ENST00000494243 ECT2Q9H8V3 914 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 SEMA4GQ9NTN9 838 aa25.54■■□□□ 1.68
TTC3-224ENST00000494243 POLR2DO15514 142 aaKnown RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 CKMP06732 381 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 DLATP10515 647 aaKnown RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 PXNP49023 591 aaPredicted RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 USP46P62068 366 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 AMPD2Q01433 879 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 CYP24A1Q07973 514 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 MAPRE1Q15691 268 aaKnown RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 UNC13DQ70J99 1090 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 NELFCDQ8IXH7 590 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 FAM160A2Q8N612 972 aaPredicted RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 FSIP1Q8NA03 581 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 MYCBPAPQ8TBZ2 947 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 ZNF516Q92618 1163 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 SNX21Q969T3 373 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 PCED1BQ96HM7 432 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 CEP295NLQ96MC4 621 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 CGRRF1Q99675 332 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 POLR3BQ9NW08 1133 aaPredicted RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 DUS2Q9NX74 493 aaKnown RBP25.53■■□□□ 1.68
TTC3-224ENST00000494243 WNT6Q9Y6F9 365 aa25.53■■□□□ 1.68
TTC3-224ENST00000494243 ATG13O75143 517 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 RNF40O75150 1001 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 TACC1O75410 805 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 HDCP19113 662 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 TNNI1P19237 187 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 GRIK1P39086 918 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 CYP2J2P51589 502 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 SNRPFP62306 86 aaKnown RBP25.52■■□□□ 1.68
TTC3-224ENST00000494243 ZXDBP98169 803 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 CSRP2Q16527 193 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 EML3Q32P44 896 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 CPA6Q8N4T0 437 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 XXYLT1Q8NBI6 393 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 SH3RF2Q8TEC5 729 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 EZH1Q92800 747 aaPredicted RBP25.52■■□□□ 1.68
TTC3-224ENST00000494243 CCDC127Q96BQ5 260 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 P2RY13Q9BPV8 354 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 RTKNQ9BST9 563 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 BLZF1Q9H2G9 400 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 LINC00597Q9H2U6 94 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 MAGEF1Q9HAY2 307 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 UBE4BO95155 1302 aa25.52■■□□□ 1.68
TTC3-224ENST00000494243 PTPRDP23468 1912 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 CCDC163A0A0D9SF12 145 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 DCDC2BA2VCK2 349 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 FAM163BP0C2L3 166 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 TCF3P15923 654 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 DRD1P21728 446 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 GNL1P36915 607 aaPredicted RBP25.51■■□□□ 1.67
TTC3-224ENST00000494243 CYP27A1Q02318 531 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 CEP68Q76N32 757 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 TTC16Q8NEE8 873 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 FNBP1Q96RU3 617 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 TTLL2Q9BWV7 592 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 PCDHA7Q9UN72 937 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 ARHGAP26Q9UNA1 814 aa25.51■■□□□ 1.67
TTC3-224ENST00000494243 ZSCAN22P10073 491 aaPredicted RBP25.5■■□□□ 1.67
TTC3-224ENST00000494243 BMT2Q1RMZ1 405 aa25.5■■□□□ 1.67
TTC3-224ENST00000494243 FOXD4L6Q3SYB3 417 aaPredicted RBP25.5■■□□□ 1.67
TTC3-224ENST00000494243 MDH1BQ5I0G3 518 aa25.5■■□□□ 1.67
TTC3-224ENST00000494243 FOXD4L3Q6VB84 417 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms