RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CCDC127Q96BQ5 260 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 SLC22A12Q96S37 553 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 XYLT2Q9H1B5 865 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 SNX25Q9H3E2 840 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 GOLPH3LQ9H4A5 285 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 GKN1Q9NS71 199 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 TDP1Q9NUW8 608 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 KIAA1549LQ6ZVL6 1849 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 MYO16Q9Y6X6 1858 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 PHACTR2O75167 634 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 NOL4O94818 638 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 CLSTN1O94985 981 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 PDE6CP51160 858 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 TNNC1P63316 161 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 NAIF1Q69YI7 327 aaPredicted RBP14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 TRIM68Q6AZZ1 485 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 Q6ZS52 159 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 ERMP1Q7Z2K6 904 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 C12orf56Q8IXR9 622 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 SUMF1Q8NBK3 374 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 GOLGA5Q8TBA6 731 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 TRMT2BQ96GJ1 504 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 KCTD10Q9H3F6 313 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 DPEP3Q9H4B8 488 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 HPS4Q9NQG7 708 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 GMEB2Q9UKD1 530 aa14.32□□□□□ -0.12
CTDSP1-212ENST00000494067 DMXL1Q9Y485 3027 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 ZNF292O60281 2723 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 WDR87Q6ZQQ6 2873 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 TRAV19A0A0A6YYK7 116 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 EXOC3O60645 756 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 LILRB5O75023 590 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 VNN1O95497 513 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 USP17L7P0C7H9 530 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 SDHBP21912 280 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 WARSP23381 471 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 GRIK1P39086 918 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 MAGEA11P43364 429 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 NDUFA8P51970 172 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 MYL6P60660 151 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 USP46P62068 366 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 DLG4P78352 724 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 GRSF1Q12849 480 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 RUNX3Q13761 415 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 PON2Q15165 354 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 TDRD10Q5VZ19 366 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 VSTM1Q6UX27 236 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 MYRFLQ96LU7 910 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 CEP295NLQ96MC4 621 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 EPC1Q9H2F5 836 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 TRPC7Q9HCX4 862 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 DMAC2Q9NW81 257 aa14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-212ENST00000494067 FAM237AA0A1B0GTK4 181 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 LRRIQ3A6PVS8 624 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 TRIM66O15016 1216 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 ATG13O75143 517 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 CKMP06732 381 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 BDNFP23560 247 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 CMA1P23946 247 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 CNR2P34972 360 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 GNL1P36915 607 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 AP3M2P53677 418 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 ZXDBP98169 803 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 SATB1Q01826 763 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 DMWDQ09019 674 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 ZNF268Q14587 947 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 KCNB1Q14721 858 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 WDR72Q3MJ13 1102 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 DCLK2Q8N568 766 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 TTC16Q8NEE8 873 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 CYP2S1Q96SQ9 504 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 FAM83CQ9BQN1 747 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 SDCBP2Q9H190 292 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 EXOC1Q9NV70 894 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 F5P12259 2224 aa14.3□□□□□ -0.12
CTDSP1-212ENST00000494067 C2orf78A6NCI8 922 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 C4BPAP04003 597 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 ARSAP15289 507 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 ATICP31939 592 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 IFNAR2P48551 515 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 CDH8P55286 799 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 CLDN10P78369 228 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms