RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 TMEM62Q0P6H9 643 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TERF2Q15554 542 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 LHX8Q68G74 356 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TWF2Q6IBS0 349 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TMEM270Q6UE05 265 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 MRPL10Q7Z7H8 261 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SLC47A2Q86VL8 602 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 UNC93AQ86WB7 457 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SPATA18Q8TC71 538 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 HPDLQ96IR7 371 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PBKQ96KB5 322 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SELENOOQ9BVL4 669 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 LHX5Q9H2C1 402 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 CDHR5Q9HBB8 845 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 MRPL47Q9HD33 250 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 NOC2LQ9Y3T9 749 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 IKBKGQ9Y6K9 419 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PDCD11Q14690 1871 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 UTRNP46939 3433 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 GRID2IPA4D2P6 1211 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 MIF4GDA9UHW6 222 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ARVCFO00192 962 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 RECQL4O94761 1208 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 MOCS3O95396 460 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CYP1A1P04798 512 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ITGB3P05106 788 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CALB1P05937 261 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ITGA4P13612 1032 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CHRNB2P17787 502 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 POLR2BP30876 1174 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 PAFAH1B1P43034 410 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 NSFP46459 744 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CTCFP49711 727 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ZNF200P98182 395 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 AMPD2Q01433 879 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CENPCQ03188 943 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 INCA1Q0VD86 236 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 BFSP2Q13515 415 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 SV2CQ496J9 727 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 UBXN11Q5T124 520 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 FAAH2Q6GMR7 532 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 C11orf63Q6NUN7 778 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 IRGCQ6NXR0 463 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 SLFN11Q7Z7L1 901 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 PHF13Q86YI8 300 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TMEM35BQ8NCS4 154 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 KAT5Q92993 513 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.08□□□□□ -1.283e-9■■□□□ 13.2
FNDC3B-212ENST00000494000 FTHL17Q9BXU8 183 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CRISPLD2Q9H0B8 497 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ERVK-5Q9HDB9 667 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 MED4Q9NPJ6 270 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 STARD7Q9NQZ5 370 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CISHQ9NSE2 258 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 PCDH10Q9P2E7 1040 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 SIX4Q9UIU6 781 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 AMFRQ9UKV5 643 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 SUFUQ9UMX1 484 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 SNX12Q9UMY4 172 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ST3GAL5Q9UNP4 418 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 AGAP1Q9UPQ3 857 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 PTPN22Q9Y2R2 807 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TRIM17Q9Y577 477 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TRIP12Q14669 1992 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CSDE1O75534 798 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 AP1G2O75843 785 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 UNGP13051 313 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 LRPAP1P30533 357 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CTHP32929 405 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 RPL9P32969 192 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CDH5P33151 784 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 NOS2P35228 1153 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 THPOP40225 353 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ASPAP45381 313 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 WDR72Q3MJ13 1102 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 FBXO47Q5MNV8 452 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 NUGGCQ68CJ6 796 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 CDR2LQ86X02 465 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 DDX42Q86XP3 938 aaKnown RBP eCLIP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 LSM14AQ8ND56 463 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TPCN2Q8NHX9 752 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 OLIG1Q8TAK6 271 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 DHRS1Q96LJ7 313 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 IRX2Q9BZI1 471 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 GDAP2Q9NXN4 497 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 WDR35Q9P2L0 1181 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TRIM10Q9UDY6 481 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 STRIP2Q9ULQ0 834 aa7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 BARX2Q9UMQ3 279 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-212ENST00000494000 A0A1W2PQ45 241 aaPredicted RBP7.07□□□□□ -1.28
FNDC3B-212ENST00000494000 A0A1W2PQY0 241 aa7.07□□□□□ -1.28
FNDC3B-212ENST00000494000 CTAGE15A4D2H0 777 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms