RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PDZD7Q9H5P4 517 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ZWILCHQ9H900 591 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 VPS37BQ9H9H4 285 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 DNAJC17Q9NVM6 304 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 TMEM51Q9NW97 253 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 EURLQ9NYK6 297 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ARL2BPQ9Y2Y0 163 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 A0A087WZ62 844 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 A0A1B0GUA9 196 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 CFAP69A5D8W1 941 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 M0QYV0 167 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 SPAG6O75602 509 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TOMM70O94826 608 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 MICAL2O94851 1124 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 IFNB1P01574 187 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TCF4P15884 667 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 GPD1P21695 349 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 HNRNPH1P31943 449 aaKnown RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 GPD2P43304 727 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 OTUD4Q01804 1114 aaKnown RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 XRCC4Q13426 336 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 MOGSQ13724 837 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 PDK2Q15119 407 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 AMHR2Q16671 573 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 BOLA3Q53S33 107 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 UBAP2Q5T6F2 1119 aaKnown RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 NUGGCQ68CJ6 796 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 ZDHHC17Q8IUH5 632 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 SRRM1Q8IYB3 904 aaKnown RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 CEP120Q8N960 986 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 PRCCQ92733 491 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TSPAN18Q96SJ8 248 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 CPXM1Q96SM3 734 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TBCBQ99426 244 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 FAM118BQ9BPY3 351 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 FDXACB1Q9BRP7 624 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TMEM121Q9BTD3 319 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 MINDY3Q9H8M7 445 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 METTL5Q9NRN9 209 aaKnown RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 AGAP1Q9UPQ3 857 aa10.12□□□□□ -0.79
NPHP3-209ENST00000493732 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-209ENST00000493732 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TCP11X1B4DZS4 312 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RASSF9O75901 435 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 KRT15P19012 456 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 GRM5P41594 1212 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 GCLCP48506 637 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 IGBP1P78318 339 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 PDIA2Q13087 525 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 CBLBQ13191 982 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 SPARCL1Q14515 664 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TMED2Q15363 201 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF792Q3KQV3 632 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 FAM102AQ5T9C2 384 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RGS9BPQ6ZS82 235 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 SPATA21Q7Z572 469 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TRABD2AQ86V40 505 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RFX6Q8HWS3 928 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ZBED8Q8IZ13 594 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ANKRD42Q8N9B4 389 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 JOSD2Q8TAC2 188 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 CXorf38Q8TB03 319 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 PYROXD1Q8WU10 500 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 USP6NLQ92738 828 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 COPS5Q92905 334 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ALKBH8Q96BT7 664 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TGS1Q96RS0 853 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ELOVL4Q9GZR5 314 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 KLC4Q9NSK0 619 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 HAUS2Q9NVX0 235 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 DPP3Q9NY33 737 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TBK1Q9UHD2 729 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF487B1APH4 448 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 E7ESA3 106 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 DNM1LO00429 736 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 PRPSAP2O60256 369 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 OAS1P00973 400 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ERBB2P04626 1255 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 GJB1P08034 283 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ARF4P18085 180 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 MIPP30301 263 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 RAP1GAPP47736 663 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 CTCFP49711 727 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 CDH8P55286 799 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 EIF3EP60228 445 aaKnown RBP10.11□□□□□ -0.79
NPHP3-209ENST00000493732 EFHC2Q5JST6 749 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TXNRD3NBQ6F5E7 133 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TAPT1Q6NXT6 567 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 MTHFD1LQ6UB35 978 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 MGARPQ8TDB4 240 aa10.11□□□□□ -0.79
NPHP3-209ENST00000493732 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms