RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 C3orf20Q8ND61 904 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 CLP1Q92989 425 aaKnown RBP13.38□□□□□ -0.27
VPS52-220ENST00000493674 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 OSGEPQ9NPF4 335 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 NT5C1B-RDH14C9J2C7 533 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TULP2O00295 520 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
VPS52-220ENST00000493674 ERBB2P04626 1255 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 NPR3P17342 541 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 ADORA2BP29275 332 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
VPS52-220ENST00000493674 TSPY1Q01534 308 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
VPS52-220ENST00000493674 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 RTP2Q5QGT7 225 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 LIN9Q5TKA1 542 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 C11orf63Q6NUN7 778 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 CLEC20AQ6ZU45 233 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 LRRTM3Q86VH5 581 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 XYLT1Q86Y38 959 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 ZNF564Q8TBZ8 553 aaPredicted RBP13.37□□□□□ -0.27
VPS52-220ENST00000493674 MYLPFQ96A32 169 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 ALS2CR12Q96Q35 445 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TMEM209Q96SK2 561 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 HERC2P3Q9BVR0 1158 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 NUP85Q9BW27 656 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
VPS52-220ENST00000493674 CSNK1G1Q9HCP0 422 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 CHST7Q9NS84 486 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TMLHEQ9NVH6 421 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 WDR35Q9P2L0 1181 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 TJP2Q9UDY2 1190 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 CHD9Q3L8U1 2897 aa13.37□□□□□ -0.27
VPS52-220ENST00000493674 FAM170AA1A519 330 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 CLDN5O00501 218 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
VPS52-220ENST00000493674 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
VPS52-220ENST00000493674 HABP4Q5JVS0 413 aaKnown RBP13.36□□□□□ -0.27
VPS52-220ENST00000493674 TAS1R1Q7RTX1 841 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 GPR65Q8IYL9 337 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 ZMIZ2Q8NF64 920 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 PIK3R5Q8WYR1 880 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 KCTD13Q8WZ19 329 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 SMARCD1Q96GM5 515 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 YME1L1Q96TA2 773 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 UBXN6Q9BZV1 441 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
VPS52-220ENST00000493674 KRT82Q9NSB4 513 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 CTTNBP2NLQ9P2B4 639 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 HELZP42694 1942 aaKnown RBP13.36□□□□□ -0.27
VPS52-220ENST00000493674 TRANK1O15050 2925 aa13.36□□□□□ -0.27
VPS52-220ENST00000493674 HHLA1C9JL84 531 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 E5RJQ4 531 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 H7C4K7 107 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 PALMO75781 387 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 BEST1O76090 585 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 SOD2P04179 222 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 PPM1AP35813 382 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 SCNN1AP37088 669 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 AMPD2Q01433 879 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 RAB41Q5JT25 222 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 CYP4A22Q5TCH4 519 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 PAPD7Q5XG87 772 aaKnown RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 RSPO2Q6UXX9 243 aaPredicted RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 KIF18AQ8NI77 898 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms