RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 INCA1Q0VD86 236 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 DUSP4Q13115 394 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 PLD1Q13393 1074 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 CUL2Q13617 745 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 MIIPQ5JXC2 388 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 GBP6Q6ZN66 633 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 C4orf50Q6ZRC1 276 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 SPPL2BQ8TCT7 592 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 NDST4Q9H3R1 872 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 MAFFQ9ULX9 164 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 SLC27A5Q9Y2P5 690 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 SOAT2O75908 522 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 CFHP08603 1231 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 SRFP11831 508 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 HOXA9P31269 272 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
CTSA-209ENST00000493522 TPM4P67936 248 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 TWF1Q12792 350 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
CTSA-209ENST00000493522 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 UVSSAQ2YD98 709 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 ARHGEF19Q8IW93 802 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 ELMOD1Q8N336 334 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 TTC39CQ8N584 583 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
CTSA-209ENST00000493522 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 TNIP3Q96KP6 325 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 DNAI2Q9GZS0 605 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 VPS16Q9H269 839 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 TSPY26PQ9H489 355 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 CBX8Q9HC52 389 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 CISHQ9NSE2 258 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
CTSA-209ENST00000493522 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
CTSA-209ENST00000493522 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
CTSA-209ENST00000493522 CILPO75339 1184 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 CAVIN2O95810 425 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 ATP1A3P13637 1013 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 ZNF18P17022 549 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
CTSA-209ENST00000493522 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 IQCB1Q15051 598 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 ZNF394Q53GI3 561 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 FAM171BQ6P995 826 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 LUZP1Q86V48 1076 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 RSAD2Q8WXG1 361 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 TWNKQ96RR1 684 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 NT5C1AQ9BXI3 368 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 ABCB6Q9NP58 842 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 FAM49BQ9NUQ9 324 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
CTSA-209ENST00000493522 HSFX1Q9UBD0 423 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
CTSA-209ENST00000493522 CA14Q9ULX7 337 aa12.32□□□□□ -0.44
CTSA-209ENST00000493522 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 POU2F2P09086 479 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 HAPLN1P10915 354 aaPredicted RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 CCDC130P13994 396 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 SLC9A1P19634 815 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 CYP2F1P24903 491 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 TUFMP49411 452 aaKnown RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 EPHB3P54753 998 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 ZC3H14Q6PJT7 736 aaKnown RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 GET4Q7L5D6 327 aaPredicted RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 FAM35AQ86V20 835 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 SCN4BQ8IWT1 228 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms