RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GLUD1P00367 558 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 CCDC172P0C7W6 258 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 CYP2F1P24903 491 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 ELF1P32519 619 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 GTF2F1P35269 517 aaKnown RBP eCLIP18.23■□□□□ 0.51
LIME1-208ENST00000493265 DUSP4Q13115 394 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 IRF2BP2Q7Z5L9 587 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 PASD1Q8IV76 773 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 SCN4BQ8IWT1 228 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 FUKQ8N0W3 1084 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 UBA3Q8TBC4 463 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 ZNF606Q8WXB4 792 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 PABPC5Q96DU9 382 aaKnown RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 SEPT5Q99719 369 aaPredicted RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 NUCKS1Q9H1E3 243 aaKnown RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 NSUN3Q9H649 340 aaKnown RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 CYP4F11Q9HBI6 524 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 KRT82Q9NSB4 513 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 ABHD10Q9NUJ1 306 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
LIME1-208ENST00000493265 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 KIAA1257Q9ULG3 409 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 PRR33A8MZF0 331 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 M0QYV0 167 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 O00370 1275 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 PRRG1O14668 218 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 MED7O43513 233 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 AP1G2O75843 785 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 VNN2O95498 520 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 CFHP08603 1231 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 EPCAMP16422 314 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 KLHL30Q0D2K2 578 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 PUS10Q3MIT2 529 aaKnown RBP18.22■□□□□ 0.51
LIME1-208ENST00000493265 MGAT5BQ3V5L5 792 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
LIME1-208ENST00000493265 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 PAQR9Q6ZVX9 377 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 FAM35AQ86V20 835 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 TC2NQ8N9U0 490 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 ZNF461Q8TAF7 563 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 EPS8L1Q8TE68 723 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
LIME1-208ENST00000493265 CLDND1Q9NY35 253 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 IMPACTQ9P2X3 320 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 HESX1Q9UBX0 185 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 AFF4Q9UHB7 1163 aaKnown RBP18.22■□□□□ 0.51
LIME1-208ENST00000493265 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
LIME1-208ENST00000493265 PLXNA3P51805 1871 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 MICAL2O94851 1124 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 ABLIM3O94929 683 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 SEC24AO95486 1093 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 MMEP08473 750 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 FAM200BP0CF97 657 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 GRIK1P39086 918 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 CLCN4P51793 760 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 CACNA2D1P54289 1103 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
LIME1-208ENST00000493265 DUSP6Q16828 381 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 DENND1BQ6P3S1 775 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 FMNL3Q8IVF7 1028 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 KREMEN2Q8NCW0 462 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 SYN2Q92777 582 aaPredicted RBP18.21■□□□□ 0.51
LIME1-208ENST00000493265 DNAJC7Q99615 494 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 CRISPLD1Q9H336 500 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
LIME1-208ENST00000493265 NOCTQ9UK39 431 aaKnown RBP18.21■□□□□ 0.51
LIME1-208ENST00000493265 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.21■□□□□ 0.51
LIME1-208ENST00000493265 SERPING1P05155 500 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 PLEKP08567 350 aaPredicted RBP18.2■□□□□ 0.5
LIME1-208ENST00000493265 ALADP13716 330 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 ATF2P15336 505 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 GPR15P49685 360 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 CLUL1Q15846 466 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 CNGA2Q16280 664 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 SDHAF4Q5VUM1 108 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 LILRA6Q6PI73 481 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 C2orf15Q8WU43 125 aaKnown RBP18.2■□□□□ 0.5
LIME1-208ENST00000493265 SMARCD1Q96GM5 515 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 MAN1C1Q9NR34 630 aa18.2■□□□□ 0.5
LIME1-208ENST00000493265 HAPLN1P10915 354 aaPredicted RBP18.19■□□□□ 0.5
LIME1-208ENST00000493265 CHRNB2P17787 502 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 TNFAIP3P21580 790 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 CDR2Q01850 454 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 HYAL1Q12794 435 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 STILQ15468 1287 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 DDR2Q16832 855 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms