RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 F8VP50 259 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
CLIP2-209ENST00000493166 MICAL2O94851 1124 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 ASGR2P07307 311 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 CCDC130P13994 396 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 GJA1P17302 382 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.24
CLIP2-209ENST00000493166 GABRR2P28476 465 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 GBP6Q6ZN66 633 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 FUKQ8N0W3 1084 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SLC2A14Q8TDB8 520 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 WHAMMQ8TF30 809 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLIP2-209ENST00000493166 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SLITRK6Q9H5Y7 841 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 KRT82Q9NSB4 513 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 GDE1Q9NZC3 331 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-209ENST00000493166 GTPBP10A4D1E9 387 aaKnown RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 NRG2O14511 850 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 DCXO43602 365 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 MOSPD3O75425 235 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 AP1G2O75843 785 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 NOL4O94818 638 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TPM2P07951 284 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 HMGA1P17096 107 aaKnown RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 ADORA2BP29275 332 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 CDC25CP30307 473 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 CACNA2D1P54289 1103 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 RAD23BP54727 409 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TEAD2Q15562 447 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 EXOC3L4Q17RC7 722 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 MIIPQ5JXC2 388 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 GAREM2Q75VX8 874 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 MTSS1LQ765P7 747 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 ARHGEF19Q8IW93 802 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 SLC4A11Q8NBS3 891 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 CYFIP2Q96F07 1278 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TRMT2BQ96GJ1 504 aaKnown RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TMEM176AQ96HP8 235 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 ATXN3LQ9H3M9 355 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 DMAP1Q9NPF5 467 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-209ENST00000493166 FANCLQ9NW38 375 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 IGSF9Q9P2J2 1179 aa13.57□□□□□ -0.24
CLIP2-209ENST00000493166 FAM200BP0CF97 657 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 ALADP13716 330 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 GCNT1Q02742 428 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 HTR4Q13639 388 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 ARHGAP15Q53QZ3 475 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 UBR7Q8N806 425 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-209ENST00000493166 KAT5Q92993 513 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 NXPE3Q969Y0 559 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
CLIP2-209ENST00000493166 BPIFA3Q9BQP9 254 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-209ENST00000493166 TMEM30AQ9NV96 361 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 EHD2Q9NZN4 543 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 SORCS3Q9UPU3 1222 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
CLIP2-209ENST00000493166 KIF26AQ9ULI4 1882 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-209ENST00000493166 TICRRQ7Z2Z1 1910 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 SLC9A1P19634 815 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 CDK11BP21127 795 aaKnown RBP13.55□□□□□ -0.24
CLIP2-209ENST00000493166 PON1P27169 355 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 MAP3K7CLP57077 242 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 CYP4F8P98187 520 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 IFRD2Q12894 506 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-209ENST00000493166 TDGQ13569 410 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 KRT31Q15323 416 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 STXBP5Q5T5C0 1151 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 GPR158Q5T848 1215 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 PPP1R26Q5T8A7 1209 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-209ENST00000493166 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
CLIP2-209ENST00000493166 RSAD2Q8WXG1 361 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms