RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CSGALNACT2Q8N6G5 542 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 KRI1Q8N9T8 703 aaKnown RBP14.7□□□□□ -0.06
SAMM50-204ENST00000493161 TSTD1Q8NFU3 115 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 USP33Q8TEY7 942 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 ATP2A3Q93084 1043 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 FGFBP2Q9BYJ0 223 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM206Q9H813 350 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 UXTQ9UBK9 157 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-204ENST00000493161 SIX4Q9UIU6 781 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 WASF3Q9UPY6 502 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 SNX9Q9Y5X1 595 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 CEP295Q9C0D2 2601 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 ANAPC1Q9H1A4 1944 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 CDX4O14627 284 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 HNRNPLP14866 589 aaKnown RBP eCLIP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 LMO2P25791 158 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 ABCD1P33897 745 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 USP46P62068 366 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 MYL7Q01449 175 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 ZNF252P-AS1Q0IIN9 211 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 FOXC1Q12948 553 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 POSTNQ15063 836 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 SF3A1Q15459 793 aaKnown RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 SOWAHAQ2M3V2 549 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 SH3PXD2AQ5TCZ1 1133 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 PMS2CLQ68D20 193 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 LMBRD2Q68DH5 695 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 ANO7Q6IWH7 933 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 NT5DC4Q86YG4 428 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 SPATA2LQ8IUW3 424 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 BRSK2Q8IWQ3 736 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 ACDQ96AP0 544 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 MRPL44Q9H9J2 332 aaKnown RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 PDE11AQ9HCR9 933 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 GDAP2Q9NXN4 497 aa14.69□□□□□ -0.06
SAMM50-204ENST00000493161 RBAKQ9NYW8 714 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-204ENST00000493161 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 SPEGQ15772 3267 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 MYMKA6NI61 221 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 GABRDO14764 452 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 SCAMP3O14828 347 aaKnown RBP14.68□□□□□ -0.06
SAMM50-204ENST00000493161 KRT19P08727 400 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 HDCP19113 662 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 SLC6A11P48066 632 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 PSMC1P62191 440 aaKnown RBP14.68□□□□□ -0.06
SAMM50-204ENST00000493161 IRX4P78413 519 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 CFAP221Q4G0U5 840 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 L1TD1Q5T7N2 865 aaKnown RBP14.68□□□□□ -0.06
SAMM50-204ENST00000493161 FAM171BQ6P995 826 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 UNQ6494/PRO21346Q6UXR6 183 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 RASSF3Q86WH2 238 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 ADGRF2Q8IZF7 708 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM86AQ8N2M4 240 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 LRRC52Q8N7C0 313 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 FRMD1Q8N878 549 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 MDGA1Q8NFP4 955 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 NOC3LQ8WTT2 800 aaKnown RBP14.68□□□□□ -0.06
SAMM50-204ENST00000493161 HVCN1Q96D96 273 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 DNAJC19Q96DA6 116 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 CBWD1Q9BRT8 395 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 MTMR12Q9C0I1 747 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 PCIF1Q9H4Z3 704 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 CRTAC1Q9NQ79 661 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 ZMIZ1Q9ULJ6 1067 aa14.68□□□□□ -0.06
SAMM50-204ENST00000493161 PTPRJQ12913 1337 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 ZZEF1O43149 2961 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 CHRM1P11229 460 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-204ENST00000493161 BDNFP23560 247 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 KCNB1Q14721 858 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 USP39Q53GS9 565 aaKnown RBP14.67□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM92Q6UXU6 159 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 TTC30AQ86WT1 665 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 TOP6BLQ8N6T0 577 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 OR5B17Q8NGF7 314 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
SAMM50-204ENST00000493161 KBTBD7Q8WVZ9 684 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 RLN3Q8WXF3 142 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 EXOC4Q96A65 974 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 ACCSQ96QU6 501 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM121BQ9BXQ6 578 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-204ENST00000493161 RNF38Q9H0F5 515 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 ZDHHC4Q9NPG8 344 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 ITGA11Q9UKX5 1188 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 ARHGAP26Q9UNA1 814 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 CLIC4Q9Y696 253 aa14.67□□□□□ -0.06
SAMM50-204ENST00000493161 NUP205Q92621 2012 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 ASPMQ8IZT6 3477 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 LEFTY2O00292 366 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 KHNYNO15037 678 aaKnown RBP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 GCNT3O95395 438 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 CYP17A1P05093 508 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 TCF3P15923 654 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 MAGEA11P43364 429 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 LHX1P48742 406 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 DHPSP49366 369 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 RBP5P82980 135 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 NR1H3Q13133 447 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 RABEP1Q15276 862 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms