RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ODC1P11926 461 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CDR1P51861 262 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 RBP5P82980 135 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 BFSP1Q12934 665 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ADAM9Q13443 819 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 SV2CQ496J9 727 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 FKBP15Q5T1M5 1219 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 OVOS1Q6IE37 1185 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 LRRC52Q8N7C0 313 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 OR10T2Q8NGX3 314 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF461Q8TAF7 563 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 HDAC7Q8WUI4 952 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.814e-9■■■□□ 15.2
BRCA1-219ENST00000491747 CCDC42Q96M95 316 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 PLEKHA4Q9H4M7 779 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 TFR2Q9UP52 801 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 MACROD2A1Z1Q3 448 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 TACC1O75410 805 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 ZMYND10O75800 440 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 C4BPAP04003 597 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 PRLRP16471 622 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 NOP2P46087 812 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 TDRD10Q5VZ19 366 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 CES5AQ6NT32 575 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 GBP6Q6ZN66 633 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 ADHFE1Q8IWW8 467 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 CMASQ8NFW8 434 aaPredicted RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF560Q96MR9 790 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 SNX12Q9UMY4 172 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 RCCD1A6NED2 376 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF185O15231 689 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 HCRTO43612 131 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 VNN1O95497 513 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 C8AP07357 584 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 SP100P23497 879 aaPredicted RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 PAX3P23760 479 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 CCNE1P24864 410 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 PNPLA4P41247 253 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 MTIF2P46199 727 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 EDRF1Q3B7T1 1238 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 USP37Q86T82 979 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 OSTM1Q86WC4 334 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 ZC3H3Q8IXZ2 948 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 MMGT1Q8N4V1 131 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 SLC7A14Q8TBB6 771 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 AENQ8WTP8 325 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 HPDLQ96IR7 371 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 CNOT6LQ96LI5 555 aaKnown RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 GDAP1L1Q96MZ0 367 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 ERGIC2Q96RQ1 377 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 PHF7Q9BWX1 381 aaPredicted RBP10□□□□□ -0.81
BRCA1-219ENST00000491747 CRISPLD1Q9H336 500 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 PRKAG3Q9UGI9 489 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 FAM50BQ9Y247 325 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 FRMD4BQ9Y2L6 1034 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 SNX9Q9Y5X1 595 aa10□□□□□ -0.81
BRCA1-219ENST00000491747 A6NNZ2 444 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 AGPSO00116 658 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 PDE2AO00408 941 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 MAPK13O15264 365 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 OPA1O60313 960 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TRIM49P0CI25 452 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TRIM49CP0CI26 452 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 MYBL2P10244 700 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ATF2P15336 505 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TCP1P17987 556 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 MYL6P60660 151 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ADCY1Q08828 1119 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 C2orf54Q08AI8 447 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 SOWAHAQ2M3V2 549 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TUBB8Q3ZCM7 444 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 C15orf39Q6ZRI6 1047 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF572Q7Z3I7 529 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 LIMS2Q7Z4I7 341 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 LRRTM3Q86VH5 581 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 FAM186BQ8IYM0 893 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 PGLYRP2Q96PD5 576 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ALS2CR12Q96Q35 445 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 DUSP9Q99956 384 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 PRKD2Q9BZL6 878 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 XYLT2Q9H1B5 865 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ZDHHC7Q9NXF8 308 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 LOC730098B7Z3J9 87 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 GOLGA8KD6RF30 607 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 EBAG9O00559 213 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 CCL16O15467 120 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 CPB1P15086 417 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 RPL13P26373 211 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 PSMC2P35998 433 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 MTHFRP42898 656 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 VAMP7P51809 220 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 MCCD1P59942 119 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 NTHL1P78549 312 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 CYP27A1Q02318 531 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 PPP3CAQ08209 521 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms