RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KIF20AO95235 890 aa8.82□□□□□ -1
LSM2-213ENST00000491421 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 NR3C1P04150 777 aa8.82□□□□□ -1
LSM2-213ENST00000491421 RPN1P04843 607 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 CKMP06732 381 aa8.82□□□□□ -1
LSM2-213ENST00000491421 FAM163BP0C2L3 166 aa8.82□□□□□ -1
LSM2-213ENST00000491421 CHRNB1P11230 501 aa8.82□□□□□ -1
LSM2-213ENST00000491421 ANXA13P27216 316 aa8.82□□□□□ -1
LSM2-213ENST00000491421 ATICP31939 592 aa8.82□□□□□ -1
LSM2-213ENST00000491421 GRIK1P39086 918 aa8.82□□□□□ -1
LSM2-213ENST00000491421 CCR3P51677 355 aa8.82□□□□□ -1
LSM2-213ENST00000491421 NDUFA8P51970 172 aa8.82□□□□□ -1
LSM2-213ENST00000491421 AP3M2P53677 418 aa8.82□□□□□ -1
LSM2-213ENST00000491421 ZNF268Q14587 947 aaPredicted RBP8.82□□□□□ -1
LSM2-213ENST00000491421 PON2Q15165 354 aa8.82□□□□□ -1
LSM2-213ENST00000491421 ZNF699Q32M78 642 aa8.82□□□□□ -1
LSM2-213ENST00000491421 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 CC2D1AQ6P1N0 951 aaPredicted RBP8.82□□□□□ -1
LSM2-213ENST00000491421 TXNDC11Q6PKC3 985 aa8.82□□□□□ -1
LSM2-213ENST00000491421 MAMSTRQ6ZN01 415 aa8.82□□□□□ -1
LSM2-213ENST00000491421 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
LSM2-213ENST00000491421 FSIP1Q8NA03 581 aa8.82□□□□□ -1
LSM2-213ENST00000491421 ZBTB44Q8NCP5 570 aa8.82□□□□□ -1
LSM2-213ENST00000491421 TTC16Q8NEE8 873 aa8.82□□□□□ -1
LSM2-213ENST00000491421 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
LSM2-213ENST00000491421 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
LSM2-213ENST00000491421 PARD3BQ8TEW8 1205 aa8.82□□□□□ -1
LSM2-213ENST00000491421 CCDC47Q96A33 483 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 PCED1BQ96HM7 432 aa8.82□□□□□ -1
LSM2-213ENST00000491421 SPATA17Q96L03 361 aa8.82□□□□□ -1
LSM2-213ENST00000491421 CEP295NLQ96MC4 621 aa8.82□□□□□ -1
LSM2-213ENST00000491421 FAM83CQ9BQN1 747 aa8.82□□□□□ -1
LSM2-213ENST00000491421 FAM126AQ9BYI3 521 aaPredicted RBP8.82□□□□□ -1
LSM2-213ENST00000491421 SCAND2PQ9GZW5 306 aaPredicted RBP8.82□□□□□ -1
LSM2-213ENST00000491421 XYLT2Q9H1B5 865 aa8.82□□□□□ -1
LSM2-213ENST00000491421 KCTD10Q9H3F6 313 aa8.82□□□□□ -1
LSM2-213ENST00000491421 GKN1Q9NS71 199 aa8.82□□□□□ -1
LSM2-213ENST00000491421 RBM12Q9NTZ6 932 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 DMAC2Q9NW81 257 aa8.82□□□□□ -1
LSM2-213ENST00000491421 RIF1Q5UIP0 2472 aaKnown RBP8.82□□□□□ -1
LSM2-213ENST00000491421 COL4A2P08572 1712 aa8.81□□□□□ -1
LSM2-213ENST00000491421 FAM237AA0A1B0GTK4 181 aa8.81□□□□□ -1
LSM2-213ENST00000491421 A0A1W2PQ27 194 aa8.81□□□□□ -1
LSM2-213ENST00000491421 A0A1W2PQ64 194 aa8.81□□□□□ -1
LSM2-213ENST00000491421 A0A1W2PQD8 194 aa8.81□□□□□ -1
LSM2-213ENST00000491421 C2orf78A6NCI8 922 aa8.81□□□□□ -1
LSM2-213ENST00000491421 F8VP50 259 aa8.81□□□□□ -1
LSM2-213ENST00000491421 CALUO43852 315 aaPredicted RBP8.81□□□□□ -1
LSM2-213ENST00000491421 USP17L7P0C7H9 530 aa8.81□□□□□ -1
LSM2-213ENST00000491421 PRR29P0C7W0 189 aa8.81□□□□□ -1
LSM2-213ENST00000491421 PTPN1P18031 435 aaKnown RBP8.81□□□□□ -1
LSM2-213ENST00000491421 CXCL12P48061 93 aa8.81□□□□□ -1
LSM2-213ENST00000491421 NRLP54845 237 aa8.81□□□□□ -1
LSM2-213ENST00000491421 CLDN10P78369 228 aa8.81□□□□□ -1
LSM2-213ENST00000491421 SATB1Q01826 763 aa8.81□□□□□ -1
LSM2-213ENST00000491421 FAM160A1Q05DH4 1040 aa8.81□□□□□ -1
LSM2-213ENST00000491421 RUNX3Q13761 415 aa8.81□□□□□ -1
LSM2-213ENST00000491421 NCOA4Q13772 614 aa8.81□□□□□ -1
LSM2-213ENST00000491421 KCNB1Q14721 858 aa8.81□□□□□ -1
LSM2-213ENST00000491421 PDGFRLQ15198 375 aa8.81□□□□□ -1
LSM2-213ENST00000491421 DGKKQ5KSL6 1271 aa8.81□□□□□ -1
LSM2-213ENST00000491421 CEP135Q66GS9 1140 aa8.81□□□□□ -1
LSM2-213ENST00000491421 TRIM68Q6AZZ1 485 aa8.81□□□□□ -1
LSM2-213ENST00000491421 Q6ZS52 159 aa8.81□□□□□ -1
LSM2-213ENST00000491421 DENND5BQ6ZUT9 1274 aa8.81□□□□□ -1
LSM2-213ENST00000491421 SPEM1Q8N4L4 309 aa8.81□□□□□ -1
LSM2-213ENST00000491421 SUMF1Q8NBK3 374 aa8.81□□□□□ -1
LSM2-213ENST00000491421 RIN3Q8TB24 985 aa8.81□□□□□ -1
LSM2-213ENST00000491421 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
LSM2-213ENST00000491421 RUBCNQ92622 972 aa8.81□□□□□ -1
LSM2-213ENST00000491421 NELL1Q92832 810 aa8.81□□□□□ -1
LSM2-213ENST00000491421 SLC22A12Q96S37 553 aa8.81□□□□□ -1
LSM2-213ENST00000491421 CYP2S1Q96SQ9 504 aa8.81□□□□□ -1
LSM2-213ENST00000491421 ELOVL4Q9GZR5 314 aa8.81□□□□□ -1
LSM2-213ENST00000491421 GOLPH3LQ9H4A5 285 aa8.81□□□□□ -1
LSM2-213ENST00000491421 DPEP3Q9H4B8 488 aa8.81□□□□□ -1
LSM2-213ENST00000491421 EBF3Q9H4W6 596 aa8.81□□□□□ -1
LSM2-213ENST00000491421 SMYD3Q9H7B4 428 aa8.81□□□□□ -1
LSM2-213ENST00000491421 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
LSM2-213ENST00000491421 HPS4Q9NQG7 708 aa8.81□□□□□ -1
LSM2-213ENST00000491421 EHD2Q9NZN4 543 aa8.81□□□□□ -1
LSM2-213ENST00000491421 FRMD4BQ9Y2L6 1034 aa8.81□□□□□ -1
LSM2-213ENST00000491421 NME7Q9Y5B8 376 aa8.81□□□□□ -1
LSM2-213ENST00000491421 PTPRZ1P23471 2315 aaPredicted RBP8.81□□□□□ -1
LSM2-213ENST00000491421 ZNF292O60281 2723 aa8.81□□□□□ -1
LSM2-213ENST00000491421 LILRB5O75023 590 aa8.8□□□□□ -1
LSM2-213ENST00000491421 RHOBTB3O94955 611 aa8.8□□□□□ -1
LSM2-213ENST00000491421 C4BPAP04003 597 aaKnown RBP8.8□□□□□ -1
LSM2-213ENST00000491421 TDGF1P13385 188 aa8.8□□□□□ -1
LSM2-213ENST00000491421 P4HA1P13674 534 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ARSAP15289 507 aa8.8□□□□□ -1
LSM2-213ENST00000491421 HDCP19113 662 aa8.8□□□□□ -1
LSM2-213ENST00000491421 RAP1GAPP47736 663 aa8.8□□□□□ -1
LSM2-213ENST00000491421 PDE6CP51160 858 aa8.8□□□□□ -1
LSM2-213ENST00000491421 USP46P62068 366 aa8.8□□□□□ -1
LSM2-213ENST00000491421 NOP14P78316 857 aaKnown RBP8.8□□□□□ -1
LSM2-213ENST00000491421 DLG4P78352 724 aa8.8□□□□□ -1
LSM2-213ENST00000491421 AMPD2Q01433 879 aa8.8□□□□□ -1
LSM2-213ENST00000491421 GRSF1Q12849 480 aaKnown RBP eCLIP8.8□□□□□ -1
LSM2-213ENST00000491421 DPYDQ12882 1025 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms