RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DPYDQ12882 1025 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 MAPRE1Q15691 268 aaKnown RBP19.23■□□□□ 0.67
HMGN1-219ENST00000491183 TSSK4Q6SA08 328 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 VSTM1Q6UX27 236 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 ADSSL1Q8N142 457 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 OR6B3Q8NGW1 331 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 ELMO3Q96BJ8 720 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 MSANTD3Q96H12 275 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 DPEP3Q9H4B8 488 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 TDP1Q9NUW8 608 aa19.23■□□□□ 0.67
HMGN1-219ENST00000491183 NXF1Q9UBU9 619 aaKnown RBP19.23■□□□□ 0.67
HMGN1-219ENST00000491183 PTPRZ1P23471 2315 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-219ENST00000491183 RHOBTB3O94955 611 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 VNN1O95497 513 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 LMNAP02545 664 aaKnown RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 NR3C1P04150 777 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 PTPN1P18031 435 aaKnown RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 CTHP32929 405 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 TNNC1P63316 161 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 PLCB2Q00722 1185 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 GAS6Q14393 721 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 MDH1BQ5I0G3 518 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 MAMSTRQ6ZN01 415 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 RALGPS2Q86X27 583 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 NELL1Q92832 810 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 SYAP1Q96A49 352 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 SPATA17Q96L03 361 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 SLC22A12Q96S37 553 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 CYP2S1Q96SQ9 504 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 FAM83CQ9BQN1 747 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 VRTNQ9H8Y1 702 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 PRMT8Q9NR22 394 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 THG1LQ9NWX6 298 aaKnown RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 TRAF3IP3Q9Y228 551 aa19.22■□□□□ 0.67
HMGN1-219ENST00000491183 RIF1Q5UIP0 2472 aaKnown RBP19.22■□□□□ 0.67
HMGN1-219ENST00000491183 ZNF202O95125 648 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 GRIK1P39086 918 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 AP3M2P53677 418 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 CDH8P55286 799 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 USP46P62068 366 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 BIRC3Q13489 604 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 C1orf220Q5T0J3 134 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 ZC3H14Q6PJT7 736 aaKnown RBP19.21■□□□□ 0.67
HMGN1-219ENST00000491183 SDCBP2Q9H190 292 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 HPS4Q9NQG7 708 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
HMGN1-219ENST00000491183 TMEM30AQ9NV96 361 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 GCNT4Q9P109 453 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 MAPK8IP1Q9UQF2 711 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 FAM186AA6NE01 2351 aa19.21■□□□□ 0.67
HMGN1-219ENST00000491183 OTOL1A6NHN0 477 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-219ENST00000491183 A8MXQ7 604 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 CACNA2D1P54289 1103 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 NCOA4Q13772 614 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-219ENST00000491183 CEP135Q66GS9 1140 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 TRIM68Q6AZZ1 485 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 ZBTB44Q8NCP5 570 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 TMC2Q8TDI7 906 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 CEP295NLQ96MC4 621 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 B3GNT5Q9BYG0 378 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 SMYD3Q9H7B4 428 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
HMGN1-219ENST00000491183 C2orf78A6NCI8 922 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 F8VP50 259 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 CLDN5O00501 218 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 TDGF1P13385 188 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 RAP1GAPP47736 663 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 RUNX3Q13761 415 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 KCNB1Q14721 858 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 PON2Q15165 354 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF699Q32M78 642 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ITPRIPL2Q3MIP1 535 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ZACNQ401N2 412 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF667Q5HYK9 610 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 DENND5BQ6ZUT9 1274 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 SV2AQ7L0J3 742 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ARL14EPQ8N8R7 260 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-219ENST00000491183 SUMF1Q8NBK3 374 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 B3GALNT2Q8NCR0 500 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 CHFRQ96EP1 664 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 C8orf48Q96LL4 319 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 IER2Q9BTL4 223 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 TTLL2Q9BWV7 592 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF518BQ9C0D4 1074 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 EBF3Q9H4W6 596 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 TRPC7Q9HCX4 862 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 ZSCAN32Q9NX65 697 aa19.19■□□□□ 0.66
HMGN1-219ENST00000491183 CFAP54Q96N23 3096 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 TRAV19A0A0A6YYK7 116 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 TRIM66O15016 1216 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 CALUO43852 315 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-219ENST00000491183 KINO60870 393 aaKnown RBP19.18■□□□□ 0.66
HMGN1-219ENST00000491183 LILRB5O75023 590 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 USP17L7P0C7H9 530 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 ARSAP15289 507 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 FAM160A1Q05DH4 1040 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms