RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 TRMT2BQ96GJ1 504 aaKnown RBP11.06□□□□□ -0.64
RBM39-236ENST00000490484 MSANTD3Q96H12 275 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MYRFLQ96LU7 910 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 XYLT2Q9H1B5 865 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
RBM39-236ENST00000490484 ZMYM5Q9UJ78 669 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 A8MXQ7 604 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 PDXKO00764 312 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 TRIM66O15016 1216 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 CALUO43852 315 aaPredicted RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 RHOBTB3O94955 611 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 CKMP06732 381 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 ATICP31939 592 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 AP3M2P53677 418 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 CLDN10P78369 228 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 CSTF1Q05048 431 aaKnown RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 NCOA4Q13772 614 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 C1orf228Q6PIY5 440 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 VSTM1Q6UX27 236 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 MON1AQ86VX9 555 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 RIN3Q8TB24 985 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 CHRDQ9H2X0 955 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 C8orf33Q9H7E9 229 aaPredicted RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 DMAC2Q9NW81 257 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 THG1LQ9NWX6 298 aaKnown RBP11.05□□□□□ -0.64
RBM39-236ENST00000490484 FBXO4Q9UKT5 387 aa11.05□□□□□ -0.64
RBM39-236ENST00000490484 FANCMQ8IYD8 2048 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 F8VP50 259 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 ZNF202O95125 648 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 KIF20AO95235 890 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 VNN1O95497 513 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 LMNAP02545 664 aaKnown RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 CHRNB1P11230 501 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 NR2F2P24468 414 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 CDH8P55286 799 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 USP46P62068 366 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 IFRD2Q12894 506 aaPredicted RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 LRRC32Q14392 662 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 KCNB1Q14721 858 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 PON2Q15165 354 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 ITPRIPL2Q3MIP1 535 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 ZNF667Q5HYK9 610 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 Q6ZS52 159 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 DENND5BQ6ZUT9 1274 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 RALGPS2Q86X27 583 aaPredicted RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 SMYD4Q8IYR2 804 aaPredicted RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 B3GALNT2Q8NCR0 500 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 TMEM174Q8WUU8 243 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 SPATA17Q96L03 361 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 ELOVL4Q9GZR5 314 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 EBF3Q9H4W6 596 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 LMAN1LQ9HAT1 526 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 RBM12Q9NTZ6 932 aaKnown RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 FRMD4BQ9Y2L6 1034 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 ZNF638Q14966 1978 aaKnown RBP11.04□□□□□ -0.64
RBM39-236ENST00000490484 ZNF292O60281 2723 aa11.04□□□□□ -0.64
RBM39-236ENST00000490484 PTPRZ1P23471 2315 aaPredicted RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 CLDN5O00501 218 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 KINO60870 393 aaKnown RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 AKAP3O75969 853 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ARSAP15289 507 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 PTPN1P18031 435 aaKnown RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 VAMP7P51809 220 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ORC1Q13415 861 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 PNOCQ13519 176 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 MTF1Q14872 753 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ZNF528Q3MIS6 628 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ZACNQ401N2 412 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 SV2AQ7L0J3 742 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 ARL14EPQ8N8R7 260 aaPredicted RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms