RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 GTF3C4Q9UKN8 822 aa12.62□□□□□ -0.39
FDPS-215ENST00000490140 ARHGAP26Q9UNA1 814 aa12.62□□□□□ -0.39
FDPS-215ENST00000490140 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
FDPS-215ENST00000490140 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 TRIM66O15016 1216 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 CAVIN2O95810 425 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 PMLP29590 882 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 STAT6P42226 847 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 DPP6P42658 865 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 CDR1P51861 262 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 DGKEP52429 567 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 CREB5Q02930 508 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 EML3Q32P44 896 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
FDPS-215ENST00000490140 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 SH3RF2Q8TEC5 729 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 LRRC15Q8TF66 581 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 SPATA17Q96L03 361 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 LSM14BQ9BX40 385 aaKnown RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 STRA6Q9BX79 667 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 KIAA1586Q9HCI6 787 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 TMLHEQ9NVH6 421 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 SRPRBQ9Y5M8 271 aaKnown RBP12.61□□□□□ -0.39
FDPS-215ENST00000490140 WNT6Q9Y6F9 365 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 ATG2BQ96BY7 2078 aa12.61□□□□□ -0.39
FDPS-215ENST00000490140 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 GABRDO14764 452 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 TADA3O75528 432 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 KCNK5O95279 499 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 HDCP19113 662 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 ACAT1P24752 427 aaKnown RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 GPR15P49685 360 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 GRIN1Q05586 938 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 CCDC6Q16204 474 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 PREPLQ4J6C6 727 aaPredicted RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 N4BP2L1Q5TBK1 243 aaPredicted RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 CYP2U1Q7Z449 544 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 CHFRQ96EP1 664 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 HPDLQ96IR7 371 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 SYT15Q9BQS2 421 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 DUSP15Q9H1R2 295 aaPredicted RBP12.6□□□□□ -0.39
FDPS-215ENST00000490140 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 EML5Q05BV3 1969 aa12.6□□□□□ -0.39
FDPS-215ENST00000490140 BCLAF3A2AJT9 711 aaKnown RBP12.59□□□□□ -0.39
FDPS-215ENST00000490140 MYMKA6NI61 221 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
FDPS-215ENST00000490140 TM4SF5O14894 197 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 KHNYNO15037 678 aaKnown RBP12.59□□□□□ -0.39
FDPS-215ENST00000490140 ADH1CP00326 375 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 GRIK1P39086 918 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 NUDT18Q6ZVK8 323 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 WDR49Q8IV35 697 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
FDPS-215ENST00000490140 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 DNAJC19Q96DA6 116 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 CNOT6LQ96LI5 555 aaKnown RBP12.59□□□□□ -0.39
FDPS-215ENST00000490140 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 TMEM9BQ9NQ34 198 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 PANK4Q9NVE7 773 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
FDPS-215ENST00000490140 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
FDPS-215ENST00000490140 NOVA1P51513 510 aaKnown RBP12.58□□□□□ -0.4
FDPS-215ENST00000490140 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
FDPS-215ENST00000490140 MRPS21P82921 87 aaKnown RBP12.58□□□□□ -0.4
FDPS-215ENST00000490140 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 KCNA1Q09470 495 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 LMAN2Q12907 356 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 SOWAHAQ2M3V2 549 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 PSAPL1Q6NUJ1 521 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 FNBP1Q96RU3 617 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 CYP2S1Q96SQ9 504 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
FDPS-215ENST00000490140 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms