RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MICAL2O94851 1124 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 TMEM63AO94886 807 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 FGFR1P11362 822 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
BRD9-208ENST00000489816 MYO1EQ12965 1108 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 ZNF449Q6P9G9 518 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 CENPUQ71F23 418 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 BBOF1Q8ND07 529 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 FBXO36Q8NEA4 188 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 CPT1BQ92523 772 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 FGD4Q96M96 766 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 SMC6Q96SB8 1091 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 NGRNQ9NPE2 291 aaKnown RBP16.49■□□□□ 0.23
BRD9-208ENST00000489816 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 HES2Q9Y543 173 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 KDELR1P24390 212 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 CDH6P55285 790 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 EIF3EP60228 445 aaKnown RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 SLC25A11Q02978 314 aaKnown RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 IGDCC3Q8IVU1 814 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 PALM2Q8IXS6 379 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 SLC4A11Q8NBS3 891 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 FBF1Q8TES7 1133 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 MIS12Q9H081 205 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.48■□□□□ 0.23
BRD9-208ENST00000489816 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 PARP14Q460N5 1801 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 NCALDP61601 193 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 XRCC4Q13426 336 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 B3GNT5Q9BYG0 378 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 KLHL14Q9P2G3 628 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 CLUHO75153 1309 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 KRT16P08779 473 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 EDNRBP24530 442 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 IL9RQ01113 521 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 LMNB2Q03252 620 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 PTPN11Q06124 597 aaPredicted RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 PPP6R3Q5H9R7 873 aaPredicted RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 XYLT1Q86Y38 959 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 TACO1Q9BSH4 297 aaKnown RBP16.48■□□□□ 0.23
BRD9-208ENST00000489816 CCDC134Q9H6E4 229 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 SLC12A4Q9UP95 1085 aa16.48■□□□□ 0.23
BRD9-208ENST00000489816 LCTP09848 1927 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 E5RJQ4 531 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 RNF8O76064 485 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 ADRA1DP25100 572 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 DARS2Q6PI48 645 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 LVRNQ6Q4G3 990 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 SCUBE3Q8IX30 993 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 DCPSQ96C86 337 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 MMP19Q99542 508 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 WDR83Q9BRX9 315 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 APOL6Q9BWW8 343 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 NOD2Q9HC29 1040 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 XPO7Q9UIA9 1087 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 USP18Q9UMW8 372 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 ARL2BPQ9Y2Y0 163 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 SIGLEC16A6NMB1 481 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 CHUKO15111 745 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 FAM155BO75949 473 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 NDST1P52848 882 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 MBTD1Q05BQ5 628 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 ACCSLQ4AC99 568 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 ZC3H12AQ5D1E8 599 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 HHATQ5VTY9 493 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 TRNP1Q6NT89 227 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 SLC35B2Q8TB61 432 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 PHTF1Q9UMS5 762 aa16.47■□□□□ 0.23
BRD9-208ENST00000489816 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
BRD9-208ENST00000489816 H7C0C1 242 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 CNMDO75829 334 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.23
BRD9-208ENST00000489816 ABCD1P33897 745 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 ATP5OP48047 213 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 NLRP7Q8WX94 980 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 ERP27Q96DN0 273 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 HPDLQ96IR7 371 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 EIF4E1BA6NMX2 242 aaKnown RBP16.46■□□□□ 0.23
BRD9-208ENST00000489816 PPEF2O14830 753 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
BRD9-208ENST00000489816 TGFB3P10600 412 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 NEFHP12036 1026 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 ATXN1P54253 815 aaKnown RBP16.46■□□□□ 0.23
BRD9-208ENST00000489816 SEPT7Q16181 437 aaKnown RBP16.46■□□□□ 0.23
BRD9-208ENST00000489816 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 MAGEB18Q96M61 343 aa16.46■□□□□ 0.23
BRD9-208ENST00000489816 PTPRHQ9HD43 1115 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms