RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PHOSPHO2Q8TCD6 241 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 C18orf8Q96DM3 657 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 IGSF21Q96ID5 467 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 HSFY1Q96LI6 401 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 ZNF558Q96NG5 402 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 CPXM1Q96SM3 734 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 NAPGQ99747 312 aaPredicted RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 PARVAQ9NVD7 372 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 MRPL42Q9Y6G3 142 aaKnown RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 MTCL1Q9Y4B5 1905 aaKnown RBP14.96□□□□□ -0.02
VPS26A-205ENST00000489656 OR6C75A6NL08 312 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 ZBBXA8MT70 800 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 XPO1O14980 1071 aaKnown RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 PALMO75781 387 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 NPR3P17342 541 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 ADORA2BP29275 332 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 PPP1R15BQ5SWA1 713 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 RASIP1Q5U651 963 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 ZNF280DQ6N043 979 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM110Q86TL2 294 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 FAM35AQ86V20 835 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 XYLT1Q86Y38 959 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 SLC39A11Q8N1S5 342 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 BCL7CQ8WUZ0 217 aaPredicted RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 MCRS1Q96EZ8 462 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 PCED1BQ96HM7 432 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 ZCWPW1Q9H0M4 648 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 MTIF3Q9H2K0 278 aaKnown RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 ABCB6Q9NP58 842 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 CXXC1Q9P0U4 656 aaPredicted RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 LCMT1Q9UIC8 334 aa14.95□□□□□ -0.02
VPS26A-205ENST00000489656 COL4A4P53420 1690 aaPredicted RBP14.95□□□□□ -0.02
VPS26A-205ENST00000489656 NT5C1B-RDH14C9J2C7 533 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 H7C4K7 107 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 BUB1BO60566 1050 aaPredicted RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 ERBB2P04626 1255 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 SYN1P17600 705 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 SCNN1AP37088 669 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 PBX3P40426 434 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 ACADSBP45954 432 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 SLC8A3P57103 927 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 MEI1Q5TIA1 1274 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 PAPD7Q5XG87 772 aaKnown RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 PMF1Q6P1K2 205 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 FAM117BQ6P1L5 589 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 CLEC20AQ6ZU45 233 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 TMCO2Q7Z6W1 182 aaPredicted RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 ZDHHC17Q8IUH5 632 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 DCP1BQ8IZD4 617 aaKnown RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 COLGALT1Q8NBJ5 622 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 MYLPFQ96A32 169 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 SMARCD1Q96GM5 515 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 LBHD1Q9BQE6 289 aaPredicted RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 CSNK1G1Q9HCP0 422 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 ZMYND8Q9ULU4 1186 aaPredicted RBP14.94□□□□□ -0.02
VPS26A-205ENST00000489656 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 SLC4A7Q9Y6M7 1214 aa14.94□□□□□ -0.02
VPS26A-205ENST00000489656 FAM170AA1A519 330 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 SIGLEC16A6NMB1 481 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 E5RJQ4 531 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 TULP2O00295 520 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 CLDN5O00501 218 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 PPM1AP35813 382 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 AMPD2Q01433 879 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 TUBB2AQ13885 445 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 NFE2Q16621 373 aaPredicted RBP14.93□□□□□ -0.02
VPS26A-205ENST00000489656 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 COL13A1Q5TAT6 717 aaPredicted RBP14.93□□□□□ -0.02
VPS26A-205ENST00000489656 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 ANKS3Q6ZW76 656 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 LRRTM3Q86VH5 581 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 HERC6Q8IVU3 1022 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
VPS26A-205ENST00000489656 FUBP3Q96I24 572 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS26A-205ENST00000489656 TTPALQ9BTX7 342 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 TUBB2BQ9BVA1 445 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 HERC2P3Q9BVR0 1158 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 VN1R3Q9BXE9 311 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 SYNCQ9H7C4 482 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 AAASQ9NRG9 546 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 CHST7Q9NS84 486 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 KRT82Q9NSB4 513 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 SPG21Q9NZD8 308 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms