RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 TRIP12Q14669 1992 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SCN1AP35498 2009 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PSME4Q14997 1843 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 A0A0A6YYK5 440 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SPATA31C2B4DYI2 1134 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CCDC188H7C350 402 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CYP1A1P04798 512 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SFNP31947 248 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 HOXD12P35452 270 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 MLH1P40692 756 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 GPC3P51654 580 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 LAMTOR4Q0VGL1 99 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 GRM1Q13255 1194 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CUL1Q13616 776 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 XKR3Q5GH77 459 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 FKBP1CQ5VVH2 108 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 NPNTQ6UXI9 565 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ZNF365Q70YC5 407 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 APBB1IPQ7Z5R6 666 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SRRM1Q8IYB3 904 aaKnown RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 LRRC34Q8IZ02 419 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 MTMR14Q8NCE2 650 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ZNF606Q8WXB4 792 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 LRRC45Q96CN5 670 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PGLYRP2Q96PD5 576 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 VCX3BQ9H321 246 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 SMYD3Q9H7B4 428 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 AS3MTQ9HBK9 375 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PCDH18Q9HCL0 1135 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 VCX3AQ9NNX9 186 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 AAASQ9NRG9 546 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ARHGEF38Q9NXL2 777 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PCDH10Q9P2E7 1040 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ARHGAP28Q9P2N2 729 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 MAGED2Q9UNF1 606 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 ZNF148Q9UQR1 794 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 EIF3FO00303 357 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 TP73O15350 636 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 MAGEB3O15480 346 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 NFICP08651 508 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 IGFBP6P24592 240 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 VARSP26640 1264 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 RCN2Q14257 317 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TMED2Q15363 201 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 MAP7D1Q3KQU3 841 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ZNF568Q3ZCX4 644 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ZACNQ401N2 412 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 DENND1BQ6P3S1 775 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 C4orf33Q8N1A6 199 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 GBP7Q8N8V2 638 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 NEK9Q8TD19 979 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 DNAJC9Q8WXX5 260 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 CD101Q93033 1021 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 NR1H4Q96RI1 486 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 DDX50Q9BQ39 737 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 SPATC1LQ9H0A9 340 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ANKEF1Q9NU02 776 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 FAM49BQ9NUQ9 324 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 UTP6Q9NYH9 597 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 HSFX1Q9UBD0 423 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 INTUQ9ULD6 942 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 SZT2Q5T011 3432 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 A0A087WZ62 844 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 BTNL10A8MVZ5 291 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 FZD9O00144 591 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 EXTL3O43909 919 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 LDHAP00338 332 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 KRT1P04264 644 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 UNGP13051 313 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 GDF10P55107 478 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 MAP3K10Q02779 954 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ZNF252P-AS1Q0IIN9 211 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 CALCOCO2Q13137 446 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TMED1Q13445 227 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 MAMLD1Q13495 774 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TRPC3Q13507 836 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 MPP2Q14168 576 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 EFCAB12Q6NXP0 572 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TMEM53Q6P2H8 277 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ZC3H18Q86VM9 953 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 NDRG1Q92597 394 aaKnown RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 GPRASP2Q96D09 838 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 FDXACB1Q9BRP7 624 aaPredicted RBP8.01□□□□□ -1.13
BEST3-205ENST00000488961 RAB17Q9H0T7 212 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 SLITRK6Q9H5Y7 841 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 CISHQ9NSE2 258 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 AKT3Q9Y243 479 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 PCDHA3Q9Y5H8 950 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 CSADQ9Y600 493 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 TTC3P53804 2025 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 ARID2Q68CP9 1835 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 UBE4BO95155 1302 aa8.01□□□□□ -1.13
BEST3-205ENST00000488961 PPEF2O14830 753 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms