RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ASB15Q8WXK1 588 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 EDAQ92838 391 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 CCDC47Q96A33 483 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 SPAG5Q96R06 1193 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ADOQ96SZ5 270 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 NCAPGQ9BPX3 1015 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 FDXACB1Q9BRP7 624 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 GPR63Q9BZJ6 419 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 EDEM3Q9BZQ6 932 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PITHD1Q9GZP4 211 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 MEGF9Q9H1U4 602 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PABPC3Q9H361 631 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ZWILCHQ9H900 591 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PRDM8Q9NQV8 689 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 KRT84Q9NSB2 600 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 HAUS2Q9NVX0 235 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PIH1D1Q9NWS0 290 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 MYOTQ9UBF9 498 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 FEZ2Q9UHY8 353 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ZHX1Q9UKY1 873 aaPredicted RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 SYNPO2Q9UMS6 1093 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PA2G4Q9UQ80 394 aaKnown RBP3.8□□□□□ -1.8
PRPF4-203ENST00000488937 ASB1Q9Y576 335 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 PCDHA13Q9Y5I0 950 aa3.8□□□□□ -1.8
PRPF4-203ENST00000488937 C17orf113A0A1B0GUU1 675 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TTC36A6NLP5 189 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 AGAP14A8MT82 685 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ASNA1O43681 348 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 FSBPO95073 299 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 NDST3O95803 873 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 APOA4P06727 396 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ADH4P08319 380 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ITGA2BP08514 1039 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 HNRNPA1P09651 372 aaKnown RBP eCLIP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 FTH1P19P0C7X4 201 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 IL1R1P14778 569 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 GSPT1P15170 499 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CCT4P50991 539 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 PRKAA2P54646 552 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ACTR2P61160 394 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ARF3P61204 181 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 IFI35P80217 286 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ARF1P84077 181 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ADCY2Q08462 1091 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 PPP2R5CQ13362 524 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CUL4BQ13620 913 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 EIF4A2Q14240 407 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 SMC1AQ14683 1233 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 RASA2Q15283 850 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 MAN2A1Q16706 1144 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ATP2B3Q16720 1220 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TTC31Q49AM3 519 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 USP39Q53GS9 565 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 GJC2Q5T442 439 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TATDN1Q6P1N9 297 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 NFRKBQ6P4R8 1299 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 FBXO38Q6PIJ6 1188 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 KDELC2Q7Z4H8 507 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ANKS1BQ7Z6G8 1248 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CEP57L1Q8IYX8 460 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CARNMT1Q8N4J0 409 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ARL10Q8N8L6 244 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 GLB1L3Q8NCI6 653 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 NEU4Q8WWR8 484 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TBC1D31Q96DN5 1066 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TOE1Q96GM8 510 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 FOXB1Q99853 325 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ADI1Q9BV57 179 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 OSBPL6Q9BZF3 934 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 C2orf40Q9H1Z8 148 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CXorf56Q9H5V9 222 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 WDCPQ9H6R7 721 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 EPS8L2Q9H6S3 715 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 RBM12Q9NTZ6 932 aaKnown RBP3.79□□□□□ -1.8
PRPF4-203ENST00000488937 RGL1Q9NZL6 768 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CALCOCO1Q9P1Z2 691 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 PI4KBQ9UBF8 816 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ABCF2Q9UG63 623 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 TBX20Q9UMR3 447 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 ARHGAP26Q9UNA1 814 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 CNPY2Q9Y2B0 182 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 MED16Q9Y2X0 877 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 PCDHA3Q9Y5H8 950 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 SNX8Q9Y5X2 465 aa3.79□□□□□ -1.8
PRPF4-203ENST00000488937 NT5C1B-RDH14C9J2C7 533 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SLC27A2O14975 620 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PIP5K1BO14986 540 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 KIAA0355O15063 1070 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SLC7A4O43246 635 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SEC24DO94855 1032 aaPredicted RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 LRG1P02750 347 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PRKCBP05771 671 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 MMEP08473 750 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CNPP09543 421 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ACADMP11310 421 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 NPPBP16860 134 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SLC6A9P48067 706 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 MRE11P49959 708 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms