RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SPTLC2O15270 562 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 TNNC2P02585 160 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 CACNA2D1P54289 1103 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 CYP27A1Q02318 531 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 MTF1Q14872 753 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 ZNF77Q15935 545 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 WDR5BQ86VZ2 330 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 SH3RF2Q8TEC5 729 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 TMEM206Q9H813 350 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 ECT2Q9H8V3 914 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 GCNT4Q9P109 453 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 MAGEC2Q9UBF1 373 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 SLC8A2Q9UPR5 921 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.31
ERGIC3-217ENST00000488935 ABCA7Q8IZY2 2146 aa17.02■□□□□ 0.31
ERGIC3-217ENST00000488935 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 GRIK1P39086 918 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 LHX1P48742 406 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 IFRD2Q12894 506 aaPredicted RBP17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 MDH1BQ5I0G3 518 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 GRAMD1CQ8IYS0 662 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 RPLP0P6Q8NHW5 317 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 P2RY13Q9BPV8 354 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 TRIM9Q9C026 710 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 DPEP3Q9H4B8 488 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 TMEM30AQ9NV96 361 aa17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
ERGIC3-217ENST00000488935 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
ERGIC3-217ENST00000488935 TRAV19A0A0A6YYK7 116 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 CLDN5O00501 218 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 RPP40O75818 363 aaKnown RBP17■□□□□ 0.31
ERGIC3-217ENST00000488935 ABL1P00519 1130 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 USP17L7P0C7H9 530 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 CCDC192P0DO97 292 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 HDCP19113 662 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 PCSK1P29120 753 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 IFNAR2P48551 515 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 CASP4P49662 377 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 SEC13P55735 322 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 FAM160A1Q05DH4 1040 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 MYO1EQ12965 1108 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 ALCAMQ13740 583 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 CSRP2Q16527 193 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 EML3Q32P44 896 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 LIMS2Q7Z4I7 341 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 SFTPA1Q8IWL2 248 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 SYNPOQ8N3V7 929 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 OSCP1Q8WVF1 389 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 ZNF516Q92618 1163 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 PCED1BQ96HM7 432 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 MYRFLQ96LU7 910 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 RTKNQ9BST9 563 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
ERGIC3-217ENST00000488935 KBTBD4Q9NVX7 518 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
ERGIC3-217ENST00000488935 UXTQ9UBK9 157 aaPredicted RBP17■□□□□ 0.31
ERGIC3-217ENST00000488935 K7ELQ4 463 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 TNNI1P19237 187 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 AFMP43652 599 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 USP4Q13107 963 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 ZNF268Q14587 947 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 CFAP221Q4G0U5 840 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 PPM1JQ5JR12 505 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 TRMT2BQ96GJ1 504 aaKnown RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 RNF38Q9H0F5 515 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 KIF9Q9HAQ2 790 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 AGPAT3Q9NRZ7 376 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 CDH9Q9ULB4 789 aa16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 CNOT1A5YKK6 2376 aaKnown RBP16.99■□□□□ 0.31
ERGIC3-217ENST00000488935 KIAA1549LQ6ZVL6 1849 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 F8VP50 259 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 SLC30A4O14863 429 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 WARSP23381 471 aaKnown RBP16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 CNR2P34972 360 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 CDH8P55286 799 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 MYL6P60660 151 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 MESP2Q0VG99 397 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms